Gene Sros_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0036 
Symbol 
ID8663299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp41245 
End bp41949 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003335839 
Protein GI271961643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.940738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG ACACGTTGAC CAAGGAACAG ATCATTCAGA CCGCTATCGA GCTGCTCGAC 
GACGAAGGCC TGGACGGCCT GAACATGCGC AGCCTGGGCA AGCGGCTCGG CACCGTCGCG
ACGGCGGTCT ACTGGCACGT CAAGAACAAG GACGACCTGA TCCTGCTCGT CGGCGACCGC
CTCTGGGACG AGGTCGAGCT GCCCGACCTC GACACGGTCG ACTGGCGCAC CGCGGCCACC
GCGATGGCCA CCAGCCTGCA CGCGATGTTC AGCCGGCACC CATGGCTCGT CCAGGCCTTC
GGCTCCCACC TCTTCTACGG CCCGGGAAAG GCGCGCCACG ACGACCACAA CCTCGCCGTC
TACGAAACGG CCGGCTTCGC CGGCACGCAG GCCGACCGCG CCGCGGCAAC CGTCTTCACA
TTCGTGCTGG GCAACGTCCT CGGCGTGTCG GCGACGGTCT CCCTGACCAG GCGGCTGAGC
CGGGACGGCG CGGATGCCGA AGCACTGTTC CAGGACACGA TGGCCAAGGC GAGCGAAGTG
GCCATGCAGT TCCCCCGGCT GCGCGCCCGC CTCGAAACAC CGGCGGCCGT GGACTACGCC
ATCGCCCCTG AGCAGACCTT CGGGTTCGGC CTCCAGACCC TCCTCGACGG CCTTGAGGCC
GAACTGGCCG GCCGCCACGT GCCGACCGGC CCACAGGCGC GCTGA
 
Protein sequence
MPRDTLTKEQ IIQTAIELLD DEGLDGLNMR SLGKRLGTVA TAVYWHVKNK DDLILLVGDR 
LWDEVELPDL DTVDWRTAAT AMATSLHAMF SRHPWLVQAF GSHLFYGPGK ARHDDHNLAV
YETAGFAGTQ ADRAAATVFT FVLGNVLGVS ATVSLTRRLS RDGADAEALF QDTMAKASEV
AMQFPRLRAR LETPAAVDYA IAPEQTFGFG LQTLLDGLEA ELAGRHVPTG PQAR