Gene MADE_00523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00523 
Symbol 
ID6777344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp555319 
End bp555921 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID642753955 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_002124835 
Protein GI196155346 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATTG TAAGTAGTGT GGTAATGAAG AACGATACTC GACAAAAAAT TTTAGAGGCT 
GCTTCGGCTT TGTTTTTAAA GGGCGGCACT AATGCGTTAA GCGTGCGTGC AATTGCAGAA 
GGTGCCGGTA TGTCTACCAT AGGCATTTAC AGCCATTTTA AAGGTAAGCA AGGCATTTTA 
GATGCGCTAT ATATCGAAGG CGTTGAGCTA GTCGAAAAAG AAATGAAAGC TGCAGATGGC 
AATACTGCGG CCGAAAAAGT GATTAATGTG TGCGAGCGTA TTCTAAATTT TTCTGAATCG 
CATACCGCAC ACTATCACCT GATATTTGCT TCTGAGCTGA AGGGTTACAC CCCTTCTGAT 
AAAGCAATAG AGGCCGGTAA AAACGTCTTT ACAACGCTTG CAACGCTTAC TGCTAGCCTT 
GCCAAAAAAG ACCTATCCGT TGAAGAAAAG CAGGACATAG CAATGCAGAT TTGGGCATTA 
AATCACGGCT ATATCACGCT TAACCAGCAT GAAATTAGTA ATCGAATAAC TTGGAACAAT 
TGGAAAGACC GTGCGCTTCA AGCTATTCGC CTGCACGTTT ACGCTCTAGT TGCGACCCAG 
TAA
 
Protein sequence
MHIVSSVVMK NDTRQKILEA ASALFLKGGT NALSVRAIAE GAGMSTIGIY SHFKGKQGIL 
DALYIEGVEL VEKEMKAADG NTAAEKVINV CERILNFSES HTAHYHLIFA SELKGYTPSD 
KAIEAGKNVF TTLATLTASL AKKDLSVEEK QDIAMQIWAL NHGYITLNQH EISNRITWNN 
WKDRALQAIR LHVYALVATQ