| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4781 |
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| Symbol | |
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| ID | 8885987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5074640 |
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| End bp | 5075326 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003513515 |
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| Protein GI | 291302237 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.809331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00725959 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGCGAA ACACGCTGAC CAGCGACCAG ATCGTCCGCG CCGCCATCGA ACTGCTGGAC
GCCGAGGGCC TGGACGGCCT CAACATGCGC GCCCTGGGCG CCAGGCTCGA CTCGGCCGCC
ACCGCCGTCT ACTGGCACGT CAAGAGCAAG GACAACCTGG TCCGGCTGGC CGGTGACCGG
GTCTGGGGCG AGATCAAACT CCCCGATGTG GACGAGAACA ACTGGCGCCC GGCCGCTCTC
GCGCTGGCCA ACAGCCTGCA CGCGATGCTG ACCGACCACG CCTGGCTCGG CCCGGCCTTC
GGCAGCTACC TGTTCTACGG TCCCGGCAAG GCCCGCTTCG ACGACCGCAG CCTGGCGGTG
TTCGAAGCCG CCGGGTTCAC GCCGGACGAA GCCGACCAGG CGGCTGGCAC GGTGATGCTG
TTCGTACTGG CCAGCTCGCT GAGCACCTCG ATGGAGCTCT CCCTGACCCG CCGCATCAGC
CGCGCGGGCG GCGACCCGAC CGAGCAGATG CGCGAAACCA TCGCCAAGCA GAGCGAGATC
GCGATGGACT ACCCGTACCT GCGCGCCCGA CTGGATTCCA CCGCCGCCAC CGACTACACC
GCCGCACCCG ACAACAGCTT CAACTTCGGC CTAGAATCCA TACTCGACGG ATTCGAGGCC
CGGTTGAAGG CCAAGGGCCG TGGCTGA
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| Protein sequence | MPRNTLTSDQ IVRAAIELLD AEGLDGLNMR ALGARLDSAA TAVYWHVKSK DNLVRLAGDR
VWGEIKLPDV DENNWRPAAL ALANSLHAML TDHAWLGPAF GSYLFYGPGK ARFDDRSLAV
FEAAGFTPDE ADQAAGTVML FVLASSLSTS MELSLTRRIS RAGGDPTEQM RETIAKQSEI
AMDYPYLRAR LDSTAATDYT AAPDNSFNFG LESILDGFEA RLKAKGRG
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