35 homologs were found in PanDaTox collection
for query gene Rsph17029_3885 on replicon NC_009050
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  100 
 
 		 114 aa  222  1e-57  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  100 
 
 		 114 aa  222  1e-57  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
-
 
NC_007802  Jann_3968  succinate dehydrogenase subunit C  63.16 
 
 		 114 aa  144  5e-34  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.617218 
 
 
-
 
NC_011892  Mnod_8671  succinate dehydrogenase, cytochrome b subunit  49.09 
 
 		 115 aa  88.6  2e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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NC_010510  Mrad2831_5987  succinate dehydrogenase cytochrome b subunit  41.82 
 
 		 125 aa  73.9  0.0000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal  0.95264 
 
 
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NC_012792  Vapar_5616  succinate dehydrogenase, cytochrome b subunit  56.98 
 
 		 114 aa  68.2  0.00000000003  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  38.3 
 
 		 144 aa  62.4  0.000000002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_008786  Veis_2513  succinate dehydrogenase, cytochrome b subunit  44 
 
 		 116 aa  62  0.000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.159074  normal  1 
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  38.71 
 
 		 154 aa  55.5  0.0000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
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NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  37.8 
 
 		 136 aa  53.5  0.0000009  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  29.47 
 
 		 134 aa  52.4  0.000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  31.03 
 
 		 139 aa  51.6  0.000003  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  27.27 
 
 		 142 aa  48.9  0.00002  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  27.27 
 
 		 142 aa  48.9  0.00002  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  27.27 
 
 		 142 aa  48.9  0.00002  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  28 
 
 		 142 aa  48.5  0.00003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  32 
 
 		 126 aa  47.4  0.00007  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  26.26 
 
 		 142 aa  47  0.00008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  31.43 
 
 		 132 aa  46.2  0.0001  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_25800  succinate dehydrogenase subunit C  30 
 
 		 126 aa  45.8  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
-
 
NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  32.86 
 
 		 126 aa  45.4  0.0002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
-
 
NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  32.86 
 
 		 126 aa  45.4  0.0003  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1182  succinate dehydrogenase subunit C  38.67 
 
 		 126 aa  45.1  0.0003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.615812  normal  1 
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  26.26 
 
 		 144 aa  44.7  0.0004  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  31.65 
 
 		 139 aa  43.9  0.0007  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
-
 
NC_007204  Psyc_0098  succinate dehydrogenase subunit C  31.13 
 
 		 128 aa  43.5  0.0009  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  30 
 
 		 142 aa  43.1  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
-
 
NC_010531  Pnec_1063  succinate dehydrogenase, cytochrome b556 subunit  30.95 
 
 		 139 aa  42.7  0.001  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.478298  normal  0.0346438 
 
 
-
 
NC_007969  Pcryo_0107  succinate dehydrogenase, cytochrome b subunit  31.13 
 
 		 128 aa  43.5  0.001  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_05380  succinate dehydrogenase subunit C  30.38 
 
 		 116 aa  42.7  0.002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
-
 
NC_007005  Psyr_2005  succinate dehydrogenase, cytochrome b subunit  27.08 
 
 		 124 aa  42.4  0.002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0924289  normal  0.135174 
 
 
-
 
NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  29.27 
 
 		 143 aa  41.6  0.004  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_009438  Sputcn32_2273  succinate dehydrogenase, cytochrome b subunit  30.34 
 
 		 131 aa  41.2  0.005  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000969939  n/a   
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  27.85 
 
 		 138 aa  40.8  0.006  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_1833  succinate dehydrogenase, cytochrome b556 subunit  29.9 
 
 		 124 aa  40  0.01  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00848853  normal  0.0380637 
 
 
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