| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1833 |
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| Symbol | |
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| ID | 6116096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2267686 |
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| End bp | 2268060 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633336 |
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| Product | succinate dehydrogenase, cytochrome b556 subunit |
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| Protein accession | YP_001760212 |
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| Protein GI | 170726186 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00848853 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0380637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAAGA AAAGACCTGT CCATTTAGAT CTGCAGACCA TTCGCTTCCC TGCAACAGCG
ATTGCGTCCA TTCTTCACCG TGTATCCGGT GTCATCATGC TGTTTGCTGT CGGTATTCTT
ATTTGGTTGT TAAATGAATC TTTAGCATCC CCTGAGAGTT TCGCGGGCAT ACAATCTCTT
TTTGATAATT TGCTAGTTAA GTTCGTCATA TGGGGAATTC TTACTGCACT TGGTTATCAC
CTTATCGTTG GCTTGCGCCA TCTGGTAATG GATACCGGGC GTTGGGAAGA GTTGGCCTCT
GGCATAGCTT CAGCAAAAGT CGCGTTTGCA TTGTCAGCCG CGTTTTCAAT CATTGTGGGG
ATTTGGGTAT GGTAA
|
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| Protein sequence | MKKKRPVHLD LQTIRFPATA IASILHRVSG VIMLFAVGIL IWLLNESLAS PESFAGIQSL
FDNLLVKFVI WGILTALGYH LIVGLRHLVM DTGRWEELAS GIASAKVAFA LSAAFSIIVG
IWVW
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