| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2273 |
|---|
| Symbol | |
|---|
| ID | 5080245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2617915 |
|---|
| End bp | 2618310 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640499435 |
|---|
| Product | succinate dehydrogenase, cytochrome b subunit |
|---|
| Protein accession | YP_001183793 |
|---|
| Protein GI | 146293369 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000969939 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGA GTGAGCAGAA CGTGAAAAAG CAAAGACCTG TCCATTTAGA TCTGCAGACC
ATTCGCTTTC CTGCAACAGC GATTGCGTCA ATTCTTCACC GTGTATCCGG TGTCATCATG
CTGTTCGCTG TTGGCATTCT GATTTGGTTG CTAAATTCCT CTTTAGCCTC CGCTGAAAGT
TTTGCTAGCG TACAATCTCT ATTTGATAAC TTCATTATGA AGTTTATCCT ATGGGGCATT
ATGACCGCAT TGGCCTATCA TTTATTCGGT GGTTTACGTC ACTTAGTAAT GGATACGGGT
CGTTGGGAAG AGTTGGCTTC GGGTACCGCC TCAGCGAAAG CTGTTTTCGT GCTAACGGTA
GCCTTTTCAA TTGTAGCGGG GATCTGGGTA TGGTAA
|
|---|
| Protein sequence | MELSEQNVKK QRPVHLDLQT IRFPATAIAS ILHRVSGVIM LFAVGILIWL LNSSLASAES
FASVQSLFDN FIMKFILWGI MTALAYHLFG GLRHLVMDTG RWEELASGTA SAKAVFVLTV
AFSIVAGIWV W
|
|---|
| |