More than 300 homologs were found in PanDaTox collection
for query gene Ping_1553 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_1553  multiple antibiotic resistance (MarC)-related proteins  100 
 
 
210 aa  396  1e-109  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.460198 
 
 
-
 
NC_009483  Gura_0644  multiple antibiotic resistance (MarC)-related protein  65.7 
 
 
210 aa  276  2e-73  Geobacter uraniireducens Rf4  Bacteria  normal  0.0517184  n/a   
 
 
-
 
NC_013889  TK90_2079  multiple antibiotic resistance (MarC)-related protein  59.9 
 
 
209 aa  217  8.999999999999998e-56  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00616176  normal 
 
 
-
 
NC_008340  Mlg_1366  multiple antibiotic resistance (MarC)-related proteins  59.62 
 
 
209 aa  192  3e-48  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0943979  normal 
 
 
-
 
NC_013946  Mrub_2097  multiple antibiotic resistance (MarC)-related protein  42.36 
 
 
206 aa  154  8e-37  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_2143  multiple antibiotic resistance (MarC)-related proteins  43.33 
 
 
214 aa  152  4e-36  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1818  multiple antibiotic resistance (MarC)-related proteins  43.94 
 
 
205 aa  150  1e-35  Jannaschia sp. CCS1  Bacteria  normal  normal  0.397202 
 
 
-
 
NC_008148  Rxyl_0955  multiple antibiotic resistance (MarC)-related proteins  49.27 
 
 
205 aa  150  1e-35  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2843  multiple antibiotic resistance (MarC)-related protein  42.13 
 
 
212 aa  150  1e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2896  multidrug ABC transporter  43.33 
 
 
206 aa  149  4e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1540  multiple antibiotic resistance (MarC)-related proteins  43.33 
 
 
206 aa  149  4e-35  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.29956  normal 
 
 
-
 
NC_009428  Rsph17025_1125  multiple antibiotic resistance (MarC)-related protein  43.33 
 
 
207 aa  147  1.0000000000000001e-34  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.0974003 
 
 
-
 
NC_011901  Tgr7_0693  multiple antibiotic resistance (MarC)-related protein  45.81 
 
 
209 aa  144  7.0000000000000006e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0953  multiple antibiotic resistance (MarC)-related proteins  41.63 
 
 
207 aa  143  2e-33  Ruegeria sp. TM1040  Bacteria  normal  0.838216  normal 
 
 
-
 
NC_012850  Rleg_1929  multiple antibiotic resistance (MarC)-related protein  42.79 
 
 
215 aa  137  7.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.604403  normal 
 
 
-
 
NC_008686  Pden_0906  multiple antibiotic resistance (MarC)-related proteins  41.09 
 
 
203 aa  134  7.000000000000001e-31  Paracoccus denitrificans PD1222  Bacteria  normal  0.201578  normal  0.0510602 
 
 
-
 
NC_009636  Smed_1240  multiple antibiotic resistance (MarC)-related protein  40.8 
 
 
209 aa  134  9e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.185324  normal  0.313526 
 
 
-
 
NC_011989  Avi_2385  hypothetical protein  39.39 
 
 
209 aa  133  1.9999999999999998e-30  Agrobacterium vitis S4  Bacteria  normal  0.0520514  n/a   
 
 
-
 
NC_008347  Mmar10_0374  multiple antibiotic resistance (MarC)-related proteins  38.16 
 
 
214 aa  132  5e-30  Maricaulis maris MCS10  Bacteria  normal  normal  0.774303 
 
 
-
 
NC_014212  Mesil_1323  multiple antibiotic resistance (MarC)-related protein  39.81 
 
 
204 aa  130  1.0000000000000001e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.199618 
 
 
-
 
NC_010581  Bind_1880  multiple antibiotic resistance (MarC)-related protein  42.64 
 
 
209 aa  129  2.0000000000000002e-29  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2518  multiple antibiotic resistance (MarC)-related proteins  39.34 
 
 
211 aa  129  4.0000000000000003e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135192  n/a   
 
 
-
 
NC_007498  Pcar_0161  hypothetical protein  37.7 
 
 
210 aa  126  2.0000000000000002e-28  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1719  multiple antibiotic resistance (MarC)-related protein  43.52 
 
 
212 aa  126  3e-28  Acidiphilium cryptum JF-5  Bacteria  normal  0.111498  n/a   
 
 
-
 
NC_011145  AnaeK_1832  multiple antibiotic resistance (MarC)-related protein  36.87 
 
 
211 aa  125  4.0000000000000003e-28  Anaeromyxobacter sp. K  Bacteria  normal  0.475063  n/a   
 
 
-
 
NC_004310  BR1098  hypothetical protein  37.19 
 
 
209 aa  125  4.0000000000000003e-28  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0355  multiple antibiotic resistance (MarC)-related protein  37.11 
 
 
206 aa  125  4.0000000000000003e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.458882 
 
 
-
 
NC_008060  Bcen_2679  multiple antibiotic resistance (MarC)-related proteins  36.6 
 
 
206 aa  125  5e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.356849  n/a   
 
 
-
 
NC_008390  Bamb_0346  multiple antibiotic resistance (MarC)-related proteins  36.6 
 
 
206 aa  125  5e-28  Burkholderia ambifaria AMMD  Bacteria  normal  0.383588  n/a   
 
 
-
 
NC_008542  Bcen2424_0428  multiple antibiotic resistance (MarC)-related proteins  36.6 
 
 
206 aa  125  5e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1917  multiple antibiotic resistance (MarC)-related protein  36.87 
 
 
211 aa  125  6e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0692726  n/a   
 
 
-
 
NC_007510  Bcep18194_A3526  multiple antibiotic resistance (MarC)-related proteins  37.95 
 
 
206 aa  124  8.000000000000001e-28  Burkholderia sp. 383  Bacteria  normal  0.303666  normal  0.286765 
 
 
-
 
NC_010508  Bcenmc03_0407  multiple antibiotic resistance (MarC)-related protein  35.75 
 
 
206 aa  124  9e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.190902 
 
 
-
 
NC_009505  BOV_1059  hypothetical protein  37.19 
 
 
209 aa  124  1e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.728304  n/a   
 
 
-
 
NC_008709  Ping_1391  multiple antibiotic resistance (MarC)-related proteins  34 
 
 
198 aa  123  2e-27  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008553  Mthe_1410  multiple antibiotic resistance (MarC)-related proteins  34.57 
 
 
231 aa  122  4e-27  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_1498  multiple antibiotic resistance (MarC)-related proteins  36.45 
 
 
219 aa  122  6e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1556  multiple antibiotic resistance (MarC)-related protein  36.87 
 
 
216 aa  121  9e-27  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011369  Rleg2_1743  multiple antibiotic resistance (MarC)-related protein  43.22 
 
 
215 aa  120  9.999999999999999e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.565671  normal  0.375082 
 
 
-
 
NC_007794  Saro_0268  multiple antibiotic resistance (MarC)-related proteins  43.94 
 
 
206 aa  119  3e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1348  multiple antibiotic resistance (MarC)-related protein  40.39 
 
 
208 aa  119  3e-26  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.160191 
 
 
-
 
NC_008048  Sala_3099  multiple antibiotic resistance (MarC)-related proteins  43.43 
 
 
209 aa  119  3e-26  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.554479  normal 
 
 
-
 
NC_009511  Swit_2873  multiple antibiotic resistance (MarC)-related protein  45.54 
 
 
213 aa  119  3.9999999999999996e-26  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0453774 
 
 
-
 
NC_008228  Patl_3498  multiple antibiotic resistance (MarC)-related proteins  36.98 
 
 
202 aa  118  6e-26  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.000000046015  n/a   
 
 
-
 
NC_009080  BMA10247_2762  MarC membrane protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2711  MarC membrane protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3663  MarC membrane protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1791  MarC membrane protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3242  MarC membrane protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3690  hypothetical protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.984937  n/a   
 
 
-
 
NC_007651  BTH_I2990  hypothetical protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia thailandensis E264  Bacteria  normal  0.792349  n/a   
 
 
-
 
NC_007760  Adeh_2046  multiple antibiotic resistance (MarC)-related proteins  36.87 
 
 
211 aa  118  7e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0331  multiple antibiotic resistance (MarC)-related protein  35.9 
 
 
206 aa  118  7e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0451  multiple antibiotic resistance (MarC)-related protein  34.74 
 
 
219 aa  118  7e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009076  BURPS1106A_3721  MarC membrane protein  38.78 
 
 
206 aa  118  7e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.596949  n/a   
 
 
-
 
NC_009667  Oant_2183  multiple antibiotic resistance (MarC)-related protein  38.42 
 
 
209 aa  117  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.118995  n/a   
 
 
-
 
NC_010681  Bphyt_3557  multiple antibiotic resistance (MarC)-related protein  37.95 
 
 
206 aa  117  9.999999999999999e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.247513  hitchhiker  0.0000492857 
 
 
-
 
NC_013889  TK90_0587  multiple antibiotic resistance (MarC)-related protein  32.83 
 
 
235 aa  117  1.9999999999999998e-25  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0123495 
 
 
-
 
NC_011146  Gbem_0428  multiple antibiotic resistance (MarC)-related protein  35.2 
 
 
219 aa  116  1.9999999999999998e-25  Geobacter bemidjiensis Bem  Bacteria  normal  0.157732  n/a   
 
 
-
 
NC_008254  Meso_1399  multiple antibiotic resistance (MarC)-related proteins  39.5 
 
 
217 aa  116  3e-25  Chelativorans sp. BNC1  Bacteria  normal  0.557326  n/a   
 
 
-
 
NC_013422  Hneap_0571  multiple antibiotic resistance (MarC)-related protein  36.27 
 
 
214 aa  114  7.999999999999999e-25  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0401  MarC family multiple antibiotic resistance protein  37.44 
 
 
206 aa  114  1.0000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3226  multiple antibiotic resistance (MarC)-related protein  37.11 
 
 
207 aa  113  3e-24  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1844  hypothetical protein  33.82 
 
 
207 aa  112  5e-24  Colwellia psychrerythraea 34H  Bacteria  normal  0.678437  n/a   
 
 
-
 
NC_011312  VSAL_I2825  integral membrane protein, MarC family  34.52 
 
 
207 aa  112  5e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG2143  hypothetical protein  33.99 
 
 
203 aa  111  7.000000000000001e-24  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0929738  n/a   
 
 
-
 
NC_007406  Nwi_1802  multiple antibiotic resistance (MarC)-related proteins  36.36 
 
 
207 aa  109  3e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0240208  normal  0.177395 
 
 
-
 
NC_014230  CA2559_08146  multiple antibiotic resistance protein MarC  36.08 
 
 
204 aa  109  3e-23  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3711  multiple antibiotic resistance protein  34.21 
 
 
212 aa  108  4.0000000000000004e-23  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.372343  normal 
 
 
-
 
NC_012856  Rpic12D_2879  multiple antibiotic resistance (MarC)-related protein  37.11 
 
 
207 aa  109  4.0000000000000004e-23  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0513768 
 
 
-
 
NC_007912  Sde_3071  MCP methyltransferase, CheR-type  37.24 
 
 
207 aa  108  7.000000000000001e-23  Saccharophagus degradans 2-40  Bacteria  normal  0.574672  normal  0.0243793 
 
 
-
 
NC_011206  Lferr_0055  multiple antibiotic resistance (MarC)-related protein  33.51 
 
 
218 aa  108  9.000000000000001e-23  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0468967  normal  0.907646 
 
 
-
 
NC_011761  AFE_0054  integral membrane protein, MarC family  33.51 
 
 
216 aa  107  9.000000000000001e-23  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.207585  n/a   
 
 
-
 
NC_008228  Patl_0612  multiple antibiotic resistance (MarC)-related proteins  34.95 
 
 
208 aa  107  1e-22  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1620  hypothetical protein  35.6 
 
 
212 aa  107  2e-22  Vibrio cholerae O395  Bacteria  normal  0.079521  n/a   
 
 
-
 
NC_003295  RSc2949  hypothetical protein  34.65 
 
 
207 aa  106  3e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  0.514078  normal 
 
 
-
 
NC_011126  HY04AAS1_0570  multiple antibiotic resistance (MarC)-related protein  32.12 
 
 
217 aa  106  3e-22  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_1406  multiple antibiotic resistance (MarC)-related protein  31.28 
 
 
213 aa  105  4e-22  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03019  hypothetical protein  35.08 
 
 
212 aa  105  4e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_00158  multiple antibiotic transporter  35.71 
 
 
208 aa  105  5e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009634  Mevan_1278  multiple antibiotic resistance (MarC)-related protein  31.55 
 
 
212 aa  105  6e-22  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010622  Bphy_2756  multiple antibiotic resistance (MarC)-related protein  35.57 
 
 
206 aa  105  6e-22  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2703  hypothetical protein  37.63 
 
 
214 aa  104  8e-22  Serratia proteamaculans 568  Bacteria  hitchhiker  0.000872945  hitchhiker  0.000692167 
 
 
-
 
NC_013456  VEA_002930  multiple antibiotic transporter  36.79 
 
 
212 aa  104  8e-22  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000449619  n/a   
 
 
-
 
NC_011901  Tgr7_2476  multiple antibiotic resistance (MarC)-related protein  29.9 
 
 
242 aa  104  9e-22  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2587  multiple antibiotic resistance (MarC)-related protein  32.5 
 
 
229 aa  104  1e-21  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.9732  normal  0.188603 
 
 
-
 
NC_009975  MmarC6_0686  multiple antibiotic resistance (MarC)-related protein  31.07 
 
 
213 aa  104  1e-21  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2943  multiple antibiotic resistance (MarC)-related protein  33.68 
 
 
205 aa  103  1e-21  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.434605 
 
 
-
 
NC_013457  VEA_001122  multiple antibiotic resistance protein marC  33.16 
 
 
213 aa  103  2e-21  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00063359  n/a   
 
 
-
 
NC_007964  Nham_1763  multiple antibiotic resistance (MarC)-related proteins  34.21 
 
 
207 aa  103  2e-21  Nitrobacter hamburgensis X14  Bacteria  normal  0.619286  n/a   
 
 
-
 
NC_013926  Aboo_0644  multiple antibiotic resistance (MarC)-related protein  35.57 
 
 
204 aa  102  3e-21  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007760  Adeh_2623  multiple antibiotic resistance (MarC)-related proteins  37.31 
 
 
217 aa  102  3e-21  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_0686  multiple antibiotic resistance (MarC)-related protein  35.45 
 
 
216 aa  102  3e-21  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.666037 
 
 
-
 
NC_007955  Mbur_0527  multiple antibiotic resistance (MarC)-related proteins  31.77 
 
 
212 aa  102  3e-21  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_1270  multiple antibiotic resistance (MarC)-related protein  30.1 
 
 
213 aa  102  5e-21  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_013521  Sked_27780  conserved hypothetical protein TIGR00427  32.12 
 
 
203 aa  102  5e-21  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.004251  normal  0.739929 
 
 
-
 
NC_010581  Bind_3347  multiple drug resistance protein MarC  31.96 
 
 
217 aa  101  6e-21  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.123982 
 
 
-
 
NC_009784  VIBHAR_06663  hypothetical protein  32.32 
 
 
220 aa  102  6e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009051  Memar_0717  multiple antibiotic resistance (MarC)-related protein  35.68 
 
 
217 aa  101  7e-21  Methanoculleus marisnigri JR1  Archaea  decreased coverage  0.000442646  n/a   
 
 
-
 
NC_011726  PCC8801_2011  multiple antibiotic resistance (MarC)-related protein  30.05 
 
 
226 aa  101  1e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
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