More than 300 homologs were found in PanDaTox collection
for query gene Mvan_4963 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_4963  short-chain dehydrogenase/reductase SDR  100 
 
 
284 aa  562  1.0000000000000001e-159  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1787  short-chain dehydrogenase/reductase SDR  88.21 
 
 
283 aa  450  1e-125  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.196947 
 
 
-
 
NC_009077  Mjls_4788  short-chain dehydrogenase/reductase SDR  83.82 
 
 
281 aa  390  1e-107  Mycobacterium sp. JLS  Bacteria  normal  normal  0.716012 
 
 
-
 
NC_008705  Mkms_4494  short-chain dehydrogenase/reductase SDR  83.4 
 
 
281 aa  387  1e-106  Mycobacterium sp. KMS  Bacteria  normal  0.627142  normal 
 
 
-
 
NC_008146  Mmcs_4407  short-chain dehydrogenase/reductase SDR  83.4 
 
 
281 aa  387  1e-106  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3694  short-chain dehydrogenase/reductase SDR  77.54 
 
 
281 aa  370  1e-101  Frankia sp. EAN1pec  Bacteria  normal  0.0437173  normal 
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  40.32 
 
 
246 aa  147  2.0000000000000003e-34  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  39.92 
 
 
246 aa  145  9e-34  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_009921  Franean1_6238  short-chain dehydrogenase/reductase SDR  37.74 
 
 
290 aa  136  3.0000000000000003e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1918  short chain dehydrogenase  35.83 
 
 
252 aa  133  3.9999999999999996e-30  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.633362  n/a   
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  37.11 
 
 
264 aa  132  6.999999999999999e-30  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3607  short-chain dehydrogenase/reductase SDR  37.85 
 
 
261 aa  130  2.0000000000000002e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.197864  n/a   
 
 
-
 
NC_013440  Hoch_5059  short-chain dehydrogenase/reductase SDR  35.57 
 
 
266 aa  130  2.0000000000000002e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5671  short-chain dehydrogenase/reductase SDR  35.29 
 
 
271 aa  130  4.0000000000000003e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4589  short-chain dehydrogenase/reductase SDR  37.15 
 
 
254 aa  128  9.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.496264  normal 
 
 
-
 
NC_007799  ECH_0669  3-oxoacyl-(acyl-carrier-protein) reductase  31.6 
 
 
247 aa  127  1.0000000000000001e-28  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.154574  n/a   
 
 
-
 
NC_007413  Ava_1863  glucose 1-dehydrogenase  34.48 
 
 
269 aa  127  2.0000000000000002e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1584  short-chain dehydrogenase/reductase SDR  36.55 
 
 
264 aa  126  4.0000000000000003e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.296993 
 
 
-
 
NC_009943  Dole_2662  short-chain dehydrogenase/reductase SDR  35.27 
 
 
266 aa  126  4.0000000000000003e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.783199  n/a   
 
 
-
 
NC_011894  Mnod_3437  short-chain dehydrogenase/reductase SDR  36.8 
 
 
262 aa  126  5e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4345  short-chain dehydrogenase/reductase SDR  37.11 
 
 
253 aa  125  8.000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  0.108758  n/a   
 
 
-
 
NC_008705  Mkms_4431  short-chain dehydrogenase/reductase SDR  37.11 
 
 
253 aa  125  8.000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  0.564431  normal  0.112699 
 
 
-
 
NC_003909  BCE_4040  short chain dehydrogenase  32.02 
 
 
254 aa  124  1e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2516  short-chain dehydrogenase/reductase SDR  37.26 
 
 
256 aa  125  1e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_006274  BCZK3748  short chain dehydrogenase  31.37 
 
 
256 aa  124  2e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4112  short chain dehydrogenase  31.62 
 
 
254 aa  124  2e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1835  3-oxoacyl-(acyl-carrier-protein) reductase  36.08 
 
 
244 aa  124  2e-27  Thermosipho melanesiensis BI429  Bacteria  normal  0.686329  n/a   
 
 
-
 
NC_009720  Xaut_2759  short-chain dehydrogenase/reductase SDR  36.69 
 
 
261 aa  124  2e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6325  short-chain dehydrogenase/reductase SDR  36.58 
 
 
254 aa  123  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.251484  normal 
 
 
-
 
NC_009077  Mjls_4725  short-chain dehydrogenase/reductase SDR  36.72 
 
 
253 aa  123  4e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1779  short-chain dehydrogenase/reductase SDR  31.5 
 
 
249 aa  123  4e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  34.41 
 
 
248 aa  123  4e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_008688  Pden_4822  short-chain dehydrogenase/reductase SDR  36.99 
 
 
253 aa  123  4e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.237012  normal  0.451819 
 
 
-
 
NC_007517  Gmet_2194  Short-chain dehydrogenase/reductase SDR  32.94 
 
 
255 aa  122  6e-27  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000131904  normal  0.0140674 
 
 
-
 
NC_013411  GYMC61_1802  gluconate 5-dehydrogenase  32.02 
 
 
260 aa  122  7e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A4095  short chain dehydrogenase  31.37 
 
 
256 aa  122  7e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1145  short chain dehydrogenase  31.37 
 
 
256 aa  122  7e-27  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_05081  3-oxoacyl-[acyl-carrier protein] reductase  33.99 
 
 
250 aa  122  8e-27  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.162194 
 
 
-
 
NC_010505  Mrad2831_3742  short-chain dehydrogenase/reductase SDR  41.15 
 
 
260 aa  122  8e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.071685 
 
 
-
 
NC_010184  BcerKBAB4_3819  short chain dehydrogenase  30.98 
 
 
264 aa  122  9e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1785  3-oxoacyl-[acyl-carrier-protein] reductase  33.6 
 
 
250 aa  121  9.999999999999999e-27  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1300  short-chain dehydrogenase/reductase SDR  37.75 
 
 
262 aa  121  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4817  short-chain dehydrogenase/reductase SDR  34.55 
 
 
275 aa  122  9.999999999999999e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.225049 
 
 
-
 
NC_007974  Rmet_5524  3-oxoacyl-(acyl-carrier-protein) reductase  37.45 
 
 
257 aa  121  9.999999999999999e-27  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1783  3-ketoacyl-(acyl-carrier-protein) reductase  32.68 
 
 
255 aa  121  9.999999999999999e-27  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000332127  n/a   
 
 
-
 
NC_011894  Mnod_2724  short-chain dehydrogenase/reductase SDR  33.47 
 
 
275 aa  121  9.999999999999999e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0725  short-chain dehydrogenase/reductase SDR  37.64 
 
 
299 aa  121  9.999999999999999e-27  Salinispora tropica CNB-440  Bacteria  normal  0.688218  normal  0.288059 
 
 
-
 
NC_009379  Pnuc_1540  short-chain dehydrogenase/reductase SDR  32.93 
 
 
267 aa  120  1.9999999999999998e-26  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.239754  n/a   
 
 
-
 
NC_007336  Reut_C6108  Short-chain dehydrogenase/reductase SDR  34.75 
 
 
255 aa  121  1.9999999999999998e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4159  short-chain dehydrogenase/reductase SDR  35.46 
 
 
256 aa  120  1.9999999999999998e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.346824  n/a   
 
 
-
 
NC_009485  BBta_6893  putative 3-oxoacyl-(acyl-carrier-protein) reductase  36.59 
 
 
266 aa  120  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00227102  normal  0.0503904 
 
 
-
 
NC_008740  Maqu_2200  short chain dehydrogenase  34.27 
 
 
256 aa  120  3e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2515  short-chain dehydrogenase/reductase SDR  34.94 
 
 
247 aa  120  3e-26  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS3900  short chain dehydrogenase  30.83 
 
 
254 aa  120  3e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1933  short-chain dehydrogenase/reductase SDR  37.55 
 
 
255 aa  120  3e-26  Caulobacter sp. K31  Bacteria  normal  0.644863  normal  0.553808 
 
 
-
 
NC_007530  GBAA_4204  short chain dehydrogenase  30.83 
 
 
254 aa  120  3e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.982997  n/a   
 
 
-
 
NC_012034  Athe_1156  3-oxoacyl-(acyl-carrier-protein) reductase  32.67 
 
 
248 aa  120  3e-26  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000536759  n/a   
 
 
-
 
NC_009719  Plav_0548  short-chain dehydrogenase/reductase SDR  34.24 
 
 
261 aa  119  3.9999999999999996e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2006  short-chain dehydrogenase/reductase SDR  36.74 
 
 
265 aa  119  3.9999999999999996e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.243411  n/a   
 
 
-
 
NC_011004  Rpal_0113  short-chain dehydrogenase/reductase SDR  36.86 
 
 
262 aa  120  3.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.351696  n/a   
 
 
-
 
NC_012560  Avin_22070  short chain dehydrogenase  35.97 
 
 
252 aa  120  3.9999999999999996e-26  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1994  short-chain dehydrogenase/reductase SDR  33.33 
 
 
245 aa  119  4.9999999999999996e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3732  short chain dehydrogenase  30.83 
 
 
254 aa  119  4.9999999999999996e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2692  short chain dehydrogenase  31.62 
 
 
254 aa  119  4.9999999999999996e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.445957  n/a   
 
 
-
 
NC_009953  Sare_0671  short-chain dehydrogenase/reductase SDR  37.55 
 
 
251 aa  119  4.9999999999999996e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  normal 
 
 
-
 
NC_009565  TBFG_11957  short chain dehydrogenase  34.62 
 
 
255 aa  119  4.9999999999999996e-26  Mycobacterium tuberculosis F11  Bacteria  normal  0.0556392  normal  0.717734 
 
 
-
 
NC_011773  BCAH820_4007  short chain dehydrogenase  30.59 
 
 
256 aa  119  6e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011071  Smal_3595  tropinone reductase  36.36 
 
 
258 aa  119  6e-26  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.855153  normal 
 
 
-
 
NC_008705  Mkms_1669  short-chain dehydrogenase/reductase SDR  36.14 
 
 
260 aa  119  7e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1808  short-chain dehydrogenase/reductase SDR  32.27 
 
 
245 aa  119  7e-26  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1283  short-chain type dehydrogenase/reductase  30.5 
 
 
277 aa  119  7e-26  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0533  short chain dehydrogenase  36.86 
 
 
257 aa  119  7.999999999999999e-26  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  35.16 
 
 
254 aa  118  9e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_009077  Mjls_2236  short-chain dehydrogenase/reductase SDR  36.14 
 
 
260 aa  118  9e-26  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007354  Ecaj_0374  3-oxoacyl-[acyl-carrier-protein] reductase  30.8 
 
 
244 aa  118  9.999999999999999e-26  Ehrlichia canis str. Jake  Bacteria  normal  0.333975  n/a   
 
 
-
 
NC_014212  Mesil_0465  short-chain dehydrogenase/reductase SDR  32.55 
 
 
258 aa  117  9.999999999999999e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2333  gluconate 5-dehydrogenase  35.43 
 
 
259 aa  117  9.999999999999999e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.885017  n/a   
 
 
-
 
NC_009338  Mflv_0566  short-chain dehydrogenase/reductase SDR  35.74 
 
 
260 aa  117  1.9999999999999998e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.639731  normal 
 
 
-
 
NC_009901  Spea_2131  short-chain dehydrogenase/reductase SDR  34.94 
 
 
262 aa  117  1.9999999999999998e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2160  Short-chain dehydrogenase/reductase  36.32 
 
 
254 aa  117  1.9999999999999998e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6809  short-chain dehydrogenase/reductase SDR  33.99 
 
 
254 aa  117  1.9999999999999998e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0661  short-chain dehydrogenase/reductase SDR  35.74 
 
 
260 aa  117  1.9999999999999998e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3468  short chain dehydrogenase  34.92 
 
 
255 aa  117  1.9999999999999998e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0157  short-chain dehydrogenase/reductase SDR  35.04 
 
 
257 aa  117  1.9999999999999998e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.0000174096  n/a   
 
 
-
 
NC_008010  Dgeo_2403  gluconate 5-dehydrogenase  34.13 
 
 
258 aa  117  1.9999999999999998e-25  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.525317  n/a   
 
 
-
 
NC_008146  Mmcs_1643  short-chain dehydrogenase/reductase SDR  35.74 
 
 
260 aa  117  1.9999999999999998e-25  Mycobacterium sp. MCS  Bacteria  normal  0.67707  n/a   
 
 
-
 
NC_010003  Pmob_0517  3-oxoacyl-(acyl-carrier-protein) reductase  34.8 
 
 
247 aa  117  1.9999999999999998e-25  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3568  short-chain dehydrogenase/reductase SDR  36.65 
 
 
253 aa  117  1.9999999999999998e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3756  gluconate 5-dehydrogenase  33.73 
 
 
257 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008703  Mkms_5627  short-chain dehydrogenase/reductase SDR  35.74 
 
 
275 aa  117  3e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1399  short-chain dehydrogenase/reductase SDR  35.5 
 
 
253 aa  117  3e-25  Jannaschia sp. CCS1  Bacteria  normal  decreased coverage  0.00235361 
 
 
-
 
NC_009092  Shew_2862  short chain dehydrogenase  34.25 
 
 
255 aa  117  3e-25  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0097  short-chain dehydrogenase/reductase SDR  34.29 
 
 
262 aa  117  3e-25  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0489  short-chain dehydrogenase/reductase SDR  35.74 
 
 
275 aa  117  3e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0834  short-chain dehydrogenase/reductase SDR  36.32 
 
 
254 aa  117  3e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1618  short-chain dehydrogenase/reductase SDR  35.74 
 
 
275 aa  117  3e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0904  short-chain dehydrogenase/reductase SDR  35.88 
 
 
258 aa  116  3.9999999999999997e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0012  3-oxoacyl-(acyl-carrier-protein) reductase  34.14 
 
 
248 aa  116  3.9999999999999997e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_3817  3-oxoacyl-(acyl-carrier-protein) reductase  34.66 
 
 
247 aa  116  3.9999999999999997e-25  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000217117  n/a   
 
 
-
 
NC_011772  BCG9842_B1654  3-ketoacyl-(acyl-carrier-protein) reductase  32.53 
 
 
246 aa  116  3.9999999999999997e-25  Bacillus cereus G9842  Bacteria  normal  normal  0.0676994 
 
 
-
 
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