| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2862 |
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| Symbol | |
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| ID | 4922241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3393742 |
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| End bp | 3394509 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640164459 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001094987 |
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| Protein GI | 127513790 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATA AATCACTGTT TGACCTAAGC GGGCGTATCG CCCTGGTAAC CGGCGCCAGC
CGCGGCATAG GCGCCGCCAT CGCCGAGCTG TTGGCCGCCT ATGGCGCCCA TGTGATTGTC
GCCAGCCGCA AGGCCGAAGG TTGCCAGACG GTGGCCGAGC AGATCATCGA CAATGGCGGC
AGCGCCGAGG CGATGGCCTG TCATGTGGGG GATCTCGAGG CCATCCAGGC CACCTTCGAG
CAGATCCAGG CCAAACACGG CAGGCTGGAT ATCCTGGTCA ACAACGCCGC CACCAACCCC
TACTTCGGCC ATATTCTCGA TACGGATCTC AATGCCTTCA ACAAGACCAT GGAGGTGAAC
CTGAGGGGCT ACTTCTTTAT GTCGGTCACC GCGGGTCGCA TGATGCGCGA GCAGGGCCAC
GGAGTGATCC TCAACACCGC CTCGGTCAAT GCGCTTCAGC CCGGGGAGAT GCAGGGGATC
TACTCCATCA GCAAGGCGGC CGTGGTCAGC ATGACTAAGG CCTTCGCCAA GGAGTGCGCG
CCGCTTGGGA TCCGCTGCAA CGCCCTGCTG CCCGGTTTCA CTAAGACCCA GTTTGCCGGC
GCCCTGTTCA ATAACGACAA GATCTATCAG CAGCTGATCG CCAGGATCCC CATGGGCCGC
CACGCCGTGC CCAGCGAGAT GGCCGGCGCC GTGCTCTATC TGGTCAGCGA TGCCAGCAGC
TACACCACAG GCGAGACCCT GGTGGTGGAT GGCGGCCTGA CGCTCTAA
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| Protein sequence | MDNKSLFDLS GRIALVTGAS RGIGAAIAEL LAAYGAHVIV ASRKAEGCQT VAEQIIDNGG
SAEAMACHVG DLEAIQATFE QIQAKHGRLD ILVNNAATNP YFGHILDTDL NAFNKTMEVN
LRGYFFMSVT AGRMMREQGH GVILNTASVN ALQPGEMQGI YSISKAAVVS MTKAFAKECA
PLGIRCNALL PGFTKTQFAG ALFNNDKIYQ QLIARIPMGR HAVPSEMAGA VLYLVSDASS
YTTGETLVVD GGLTL
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