Gene Tmel_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1835 
Symbol 
ID5297676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1818456 
End bp1819190 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content37% 
IMG OID640770103 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001307055 
Protein GI150021701 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.686329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTAG AAGGGAAAGT ATGTATAATA ACAGGAGCAG GAAGTGGGAT AGGAAAGGCA 
GCGGCACTTT TATTTTCCCA AGAAGGAGCG AAAGTCATAG CGTGTGATGT TGTTGAGGAA
AATTTAAAAA AGTTAAAAGA GGAAGATGAC AGAATAGATG TTTTTGTGTT AGATGTAACA
AACAGAGAAG CAATACAAAA TATGGTTGAT AATGTGGTTG AAAAATATGG AAGGATAGAT
GTATTGGTGA ATAACGCGGG AATAACAAGA GATGCATTGT TGCTAAAGAT GAAGGAAGAA
GATTGGGACG CAGTAATAAA TGTAAACTTA AAGGGTGTGT TTAACATGAC TCAGGCAATA
GCACCGATAA TGTTAAAGCA GGGAAAAGGA AGTATAATAA ATACATCGTC GGTAGTAGGA
GTGTATGGAA ATATAGGACA GACTAATTAT TCGGCAACGA AGGCTGGAAT AATAGGAATG
ACAAAGACCT GGGCAAAAGA GCTAGCGAGA AAAGGAGCAC AAATAAGGGT AAATGCAGTA
GCGCCAGGAT TTATAAAGAC ACCGATGACG GAAAAAGTAC CGGAGAGGAT AATAAATGCA
TTAAATGAAA AAATACCATT AAAAAGGATG GGTGAAGCTG AAGAAGTAGC AAGAGTGTAT
TTATTTCTAG CATCAGATGA ATCTTCATAT ATTACTGGCC AGGTTATTGG TGTTGATGGG
GGATTAGTTA TATAA
 
Protein sequence
MRLEGKVCII TGAGSGIGKA AALLFSQEGA KVIACDVVEE NLKKLKEEDD RIDVFVLDVT 
NREAIQNMVD NVVEKYGRID VLVNNAGITR DALLLKMKEE DWDAVINVNL KGVFNMTQAI
APIMLKQGKG SIINTSSVVG VYGNIGQTNY SATKAGIIGM TKTWAKELAR KGAQIRVNAV
APGFIKTPMT EKVPERIINA LNEKIPLKRM GEAEEVARVY LFLASDESSY ITGQVIGVDG
GLVI