| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4817 |
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| Symbol | |
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| ID | 4693459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5320069 |
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| End bp | 5320896 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639852557 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_999527 |
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| Protein GI | 121611720 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.225049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCATC CACCCATCCG TCAACCCCTC ATGAACGACA TCCCATCCAA GCCCCGCGTC
GCTGTGGTCA CCGGAGGCGC TCGCGGCATC GGGCGCGCCA TCGGTGAATG GTTTTTGCAT
CATCACTACC AGGTCGCCCT GCTGGACATC GACGGGCCAA CGCTGGACAG CGCGCTGGCA
GAGATGGCCC CGGCACAGGG GCTGATCGGC ATCCACTGCG ATGTCTCCGA CCCGGCGCAG
GTGCAACGCG CCACCGGGCA GGTGATGGCC CGCTTCGGGC AGGTCAACGC CCTGGTCAAC
AACGCGGGGG TGGCCATTTT CAAGCCCTGC GCAGAGATCT CCTTTGCCCA ATGGCGCTCG
GTGATGGCCA CCAACCTGGA CGGGGCTTTC CTGTGCACGC AGGCTTTTGG CGCGCTGATG
GCGCAGGGCC AAGGCGGCGC CATCGTGAAC ATTGCCTCGA TCTCCGGCCT GCGCGCCAGC
ACCTTGCGCG TGGCCTATGG AACCAGCAAG GCCGCGCTGA TCCATTTGAC CCGGCAATAC
GCCGTGGAAC TTGGCAATGT CGGGGTGCGC GTCAACGCGA TCGCCCCCGG GCCGGTGGAA
ACCGAAATGG CCAAGCTGGT GCACAGCGTT GCCCTGCGCA GCGACTACTA CGACGCCATT
CCGCTGGGGC GCTACGGGAC GGTTCAGGAG ATGGCCCGGA CCGTGGGCTT TCTGTGCAGC
GATGAGGCCA GTTTCATCAA TGGCCAGGTG CTGGCCGTCG ATGGCGGGTT CGATGCCGCC
GGGGTGGGCC TGCCCACGCT GCGCCGGCGC ATGGGCGCGC CCGGCTGA
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| Protein sequence | MIHPPIRQPL MNDIPSKPRV AVVTGGARGI GRAIGEWFLH HHYQVALLDI DGPTLDSALA
EMAPAQGLIG IHCDVSDPAQ VQRATGQVMA RFGQVNALVN NAGVAIFKPC AEISFAQWRS
VMATNLDGAF LCTQAFGALM AQGQGGAIVN IASISGLRAS TLRVAYGTSK AALIHLTRQY
AVELGNVGVR VNAIAPGPVE TEMAKLVHSV ALRSDYYDAI PLGRYGTVQE MARTVGFLCS
DEASFINGQV LAVDGGFDAA GVGLPTLRRR MGAPG
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