| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2662 |
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| Symbol | |
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| ID | 5695513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3202717 |
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| End bp | 3203517 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641265270 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001530542 |
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| Protein GI | 158522672 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.783199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA GTAAACTGTT TTCACTGGAG AACAAGACGG CCCTTGTCAC CGGCGGTTCC
ATGGGCATCG GCCGGGCCAC GGCCCTGGCC TTTGCCGATG CCGGGGCTGA CGTGGCCATT
GTCAGCCGCA AGATGGAAAA CCTGGCCCCC GTGGCCGAAG AGATAAAGGC CAAAGGGAAA
AGGTGCCTGC CCGTGGCGGC CCACGTGGGC CGCATGGACC AGCTTCCCGC CATTGTGGAG
CAGGTGGTTG CCGAGTTCGG ACAAATCGAC ATCCTGGTCA ACAACGCGGC CACCAGCCCG
GCCTATGCCA CCATTTTCGA AGCCCAGGAA AAACTGTGGG ATTCGATCAT CGGCCTCAAT
CTCAAGGGGC TCTATTTTCT GAGCCAGGCC GTGGCCCGGG TCATGGAAGA AAAGGGCGCC
GGCGGTTCCA TCATCAACGT CTCCTCCATC GACGGGTTCG CGCCCCAGGC CCAGGTGGGC
ATCTACTCCA TCTCCAAGGC CGGGGTCAAT ATGGCCACCC GCTCCATGGC CCTGGAACTG
GCGCCTCACA AGATCCGGGT CAATGCCATT GCGCCGGGGG CCACGCGCAC CAAGCTCTTT
GAAGGGCTGT TCGCCTTTCT GCCGGAAGAC GAAAGGGAAA AACAGATTCA GCAGATCGGC
CAGGCCTTTC CCCTGGGCCG GGTGGCCGTG CCCGACGACA TGGTGGGGCT GATGCTCTAC
CTGGCCTCTG ACGCCTCGGC CTACATGACC GGCCAGGTGG TGGCCGTGGA GGGCGGGGTG
CTGCTGCACG GGGGGCTGTA A
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| Protein sequence | MEISKLFSLE NKTALVTGGS MGIGRATALA FADAGADVAI VSRKMENLAP VAEEIKAKGK
RCLPVAAHVG RMDQLPAIVE QVVAEFGQID ILVNNAATSP AYATIFEAQE KLWDSIIGLN
LKGLYFLSQA VARVMEEKGA GGSIINVSSI DGFAPQAQVG IYSISKAGVN MATRSMALEL
APHKIRVNAI APGATRTKLF EGLFAFLPED EREKQIQQIG QAFPLGRVAV PDDMVGLMLY
LASDASAYMT GQVVAVEGGV LLHGGL
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