| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2006 |
|---|
| Symbol | |
|---|
| ID | 8640035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013526 |
|---|
| Strand | + |
|---|
| Start bp | 129589 |
|---|
| End bp | 130386 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003323732 |
|---|
| Protein GI | 269839040 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.243411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACGG ACAAGTTGAG GCTAGATGGC AAGGTAGCGC TGGTGACTGG TGGTAGCCAG
GGACTGGGCA GGGCCATGGC GGTGGCGTTG GCGGAGGCCG GGGCGGACGT GGCGCTCTGC
GCCCGCAGCC GGGAGAGGCT GTGCGCCGTG GCCGATGAGA TCCGCGCCCT GGGCAGGGGG
GCCCTCGTGC TGCCGGCAGA CCTGTCGGAC GTCGATGCCG CCGTGGGGGT GGTGGACGAC
GTCGTCCGCC GGCTGGGGAG GCTGGACGTG CTGGTGACCT CCGCCGCCAC CCAGCTCCGG
AAGCCCGCGC TCGAGGTCAC CCTCGAGGAG TGGGACCGCC TGGTGGCGGT GAACCTCCGC
TCCGTGTACT TCATGTGCCA GCGCGCCGCC CAGCACATGA TCGCGCGCGA GGACGTGCCG
GCTGGGGCTT CCAGGGGCAA GATCATCAAC ATAGCCTCTC TAACCTCCGT GGGGGCCTGG
CCCGACGTGA GCGTGTACGC CACGACGAAG GGGGGCATCC TGCAGATGAC GAGGGCGTTC
GCGCTGGAGT GGGCCAGGTA CCACATCTGC GTCAACGCCA TAGGCCCTGG CACCTTCCAC
ACGGAGCTGA CCGATGCCCT GTACTCGGAC CCGGAGCGCG CCCAGAGGAT AGTGTCGCGC
ATCCCGCTGG GCAGAGCCGG GCTGCCGGAG GACCTGGCGG GGGCGGTGGT CTACCTGGCC
TCTCCCGCCT CGGACTACGT TACCGGCCAG GTGCTGTGGG TGGATGGGGG CTTTATGCTG
ATGGGAGCGG GCCTATGA
|
|---|
| Protein sequence | MVTDKLRLDG KVALVTGGSQ GLGRAMAVAL AEAGADVALC ARSRERLCAV ADEIRALGRG
ALVLPADLSD VDAAVGVVDD VVRRLGRLDV LVTSAATQLR KPALEVTLEE WDRLVAVNLR
SVYFMCQRAA QHMIAREDVP AGASRGKIIN IASLTSVGAW PDVSVYATTK GGILQMTRAF
ALEWARYHIC VNAIGPGTFH TELTDALYSD PERAQRIVSR IPLGRAGLPE DLAGAVVYLA
SPASDYVTGQ VLWVDGGFML MGAGL
|
|---|
| |