More than 300 homologs were found in PanDaTox collection
for query gene Dd703_1346 on replicon NC_012880
Organism: Dickeya dadantii Ech703



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012880  Dd703_1346  binding-protein-dependent transport systems inner membrane component  100 
 
 
305 aa  605  9.999999999999999e-173  Dickeya dadantii Ech703  Bacteria  normal  0.0217917  n/a   
 
 
-
 
NC_012912  Dd1591_4125  binding-protein-dependent transport systems inner membrane component  85.57 
 
 
305 aa  527  1e-149  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5252  ABC transporter membrane spanning protein (sugar)  64.47 
 
 
303 aa  384  1e-105  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0502  binding-protein-dependent transport systems inner membrane component  41.52 
 
 
294 aa  233  4.0000000000000004e-60  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000387923  n/a   
 
 
-
 
NC_012852  Rleg_6131  binding-protein-dependent transport systems inner membrane component  41.02 
 
 
433 aa  181  1e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.336729  normal  0.227822 
 
 
-
 
NC_011371  Rleg2_6543  binding-protein-dependent transport systems inner membrane component  40.62 
 
 
433 aa  176  4e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.903497  normal  0.436322 
 
 
-
 
NC_008148  Rxyl_2070  binding-protein-dependent transport systems inner membrane component  37 
 
 
314 aa  173  2.9999999999999996e-42  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1175  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
304 aa  159  8e-38  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  29.75 
 
 
288 aa  110  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  28.32 
 
 
307 aa  109  6e-23  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  28.32 
 
 
307 aa  109  6e-23  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  29.12 
 
 
322 aa  107  3e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
309 aa  107  3e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_007777  Francci3_0462  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
301 aa  105  7e-22  Frankia sp. CcI3  Bacteria  normal  0.0599651  normal  0.184722 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  29.31 
 
 
313 aa  105  9e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  29.74 
 
 
316 aa  104  2e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  30.07 
 
 
306 aa  103  5e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  30.03 
 
 
321 aa  102  8e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
317 aa  101  1e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  30.36 
 
 
291 aa  101  1e-20  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  26.71 
 
 
309 aa  101  2e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_4750  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
299 aa  99.4  7e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.62916  normal  0.701692 
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  30.3 
 
 
304 aa  98.6  1e-19  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  29.14 
 
 
316 aa  98.6  1e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4663  binding-protein-dependent transport systems inner membrane component  27.89 
 
 
299 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.456499 
 
 
-
 
NC_013131  Caci_2015  binding-protein-dependent transport systems inner membrane component  27.14 
 
 
312 aa  98.6  1e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.514921  normal 
 
 
-
 
NC_009921  Franean1_6155  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
314 aa  98.2  1e-19  Frankia sp. EAN1pec  Bacteria  normal  normal  0.602871 
 
 
-
 
NC_012850  Rleg_3778  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
295 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0395577  normal 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  27.56 
 
 
298 aa  98.6  1e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
296 aa  98.6  1e-19  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  29.34 
 
 
318 aa  98.2  2e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  30.96 
 
 
292 aa  97.1  3e-19  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  31.11 
 
 
296 aa  97.4  3e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
299 aa  97.1  3e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_2009  binding-protein-dependent transport systems inner membrane component  25.68 
 
 
291 aa  96.3  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3574  carbohydrate ABC transporter permease  27.05 
 
 
294 aa  96.3  6e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_3708  binding-protein-dependent transport systems inner membrane component  27.05 
 
 
294 aa  96.3  6e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3621  binding-protein-dependent transport systems inner membrane component  26.81 
 
 
305 aa  95.9  7e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.980812  normal 
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  26.02 
 
 
314 aa  95.9  8e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  26.18 
 
 
308 aa  95.9  8e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  26.64 
 
 
300 aa  95.9  8e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  30.97 
 
 
296 aa  95.5  9e-19  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_010159  YpAngola_A4017  carbohydrate ABC transporter permease  27.05 
 
 
294 aa  95.5  9e-19  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3554  binding-protein-dependent transport systems inner membrane component  27.74 
 
 
311 aa  95.5  1e-18  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6527  binding-protein-dependent transport systems inner membrane component  23.78 
 
 
307 aa  95.1  1e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0292278 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  30.22 
 
 
287 aa  94.4  2e-18  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2631  binding-protein-dependent transport systems inner membrane component  29.18 
 
 
305 aa  94.4  2e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  28.33 
 
 
293 aa  94.4  2e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
309 aa  94.4  2e-18  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_012850  Rleg_3909  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
305 aa  94.7  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.172275 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  25.77 
 
 
309 aa  94.4  2e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  28.12 
 
 
312 aa  94.4  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011899  Hore_22990  binding-protein-dependent transport systems inner membrane component  29.56 
 
 
286 aa  93.6  4e-18  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000108841  n/a   
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  27.82 
 
 
306 aa  93.6  4e-18  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_012669  Bcav_2602  binding-protein-dependent transport systems inner membrane component  27.59 
 
 
306 aa  93.2  4e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0924232  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
316 aa  93.2  4e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3676  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
309 aa  93.2  5e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0353  binding-protein-dependent transport systems inner membrane component  28.18 
 
 
317 aa  93.2  5e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0740262  n/a   
 
 
-
 
NC_012848  Rleg_5336  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
310 aa  92.8  6e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.369054 
 
 
-
 
NC_013172  Bfae_01240  permease component of ABC-type sugar transporter  33.33 
 
 
334 aa  92.8  6e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4082  binding-protein-dependent transport systems inner membrane component  29.69 
 
 
302 aa  92.8  7e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5714  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
310 aa  92.8  7e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.568061 
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  30.37 
 
 
296 aa  92.4  8e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  25.53 
 
 
307 aa  92.4  8e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  27.74 
 
 
308 aa  92.4  8e-18  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_008698  Tpen_1056  binding-protein-dependent transport systems inner membrane component  26.51 
 
 
313 aa  92.4  9e-18  Thermofilum pendens Hrk 5  Archaea  normal  0.355645  n/a   
 
 
-
 
NC_013525  Tter_1094  binding-protein-dependent transport systems inner membrane component  26.03 
 
 
307 aa  92.4  9e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  29.35 
 
 
321 aa  92  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2909  binding-protein-dependent transport systems inner membrane component  26.53 
 
 
348 aa  92  1e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.120786  normal  0.0549624 
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  28.94 
 
 
285 aa  92  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  27.55 
 
 
295 aa  91.7  1e-17  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  27.82 
 
 
300 aa  91.7  1e-17  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  27.61 
 
 
291 aa  91.7  1e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  26.67 
 
 
309 aa  91.3  2e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_1946  binding-protein-dependent transport systems inner membrane component  27.24 
 
 
320 aa  90.9  2e-17  Arthrobacter sp. FB24  Bacteria  normal  0.305055  n/a   
 
 
-
 
NC_013131  Caci_5026  binding-protein-dependent transport systems inner membrane component  27.34 
 
 
296 aa  91.3  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0515819  normal  0.562108 
 
 
-
 
NC_013093  Amir_1844  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
291 aa  91.3  2e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  0.476032  n/a   
 
 
-
 
NC_009620  Smed_4160  binding-protein-dependent transport systems inner membrane component  29.08 
 
 
305 aa  90.9  2e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.255761  normal  0.778964 
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  30 
 
 
296 aa  91.3  2e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
317 aa  91.3  2e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  30 
 
 
296 aa  91.3  2e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_007778  RPB_2547  binding-protein dependent transport system inner membrane protein  26.99 
 
 
312 aa  90.9  3e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.194318  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  29.24 
 
 
309 aa  90.5  3e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013172  Bfae_15390  carbohydrate ABC transporter membrane protein  27.91 
 
 
314 aa  90.5  3e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  0.642568  n/a   
 
 
-
 
NC_013526  Tter_2501  binding-protein-dependent transport systems inner membrane component  27.84 
 
 
312 aa  90.5  3e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  28.32 
 
 
320 aa  90.9  3e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  26.24 
 
 
296 aa  90.1  4e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0064  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
317 aa  90.1  4e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  26.12 
 
 
301 aa  90.1  4e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  30 
 
 
296 aa  90.1  4e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  27.85 
 
 
308 aa  90.1  4e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_013947  Snas_1409  binding-protein-dependent transport systems inner membrane component  29.68 
 
 
322 aa  90.1  4e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  27.21 
 
 
290 aa  89.7  5e-17  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_011899  Hore_14540  binding-protein-dependent transport systems inner membrane component  27.3 
 
 
289 aa  89.7  5e-17  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000000851926  n/a   
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  26.49 
 
 
305 aa  89.7  5e-17  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  28.12 
 
 
316 aa  89.7  6e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_007493  RSP_1443  ABC sugar transporter, inner membrane subunit  29.2 
 
 
303 aa  89.4  7e-17  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0903613  n/a   
 
 
-
 
NC_013131  Caci_6903  binding-protein-dependent transport systems inner membrane component  27.49 
 
 
324 aa  89.4  7e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0156181  normal  0.0141251 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  28.86 
 
 
310 aa  89.4  7e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0092  binding-protein-dependent transport systems inner membrane component  29.2 
 
 
296 aa  89.4  7e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>