| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6155 |
|---|
| Symbol | |
|---|
| ID | 5674476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 7488545 |
|---|
| End bp | 7489489 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641245007 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001510405 |
|---|
| Protein GI | 158317897 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.602871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAGG GGACTAGAAC CGGGCGGGAC GGCTGGCGGG CGGCCGCGCT GTTGACGCCC
GCCTTTGTCG GGCTGTGCGT GTTCGTCATC GGCCCGGCGA TCGTGTCGGC CTTCGTCGCC
GGCACCGACA AGAACCTCAC CGGCCCGGAC TTCCACTGGG TAGGGACGGC GAACCTGCGC
GAGGCGCTGG CGGACCCCGA TCTCGGCCAG GCCGTCCGCA ACACGCTGGT CTACTGCCTG
TTGACGGTCA TTCCGTCCGT TCTGTTCGGC CTGTTGCTGG CACTCGCGGC CGAACGGGTG
ACCCGCGGCC GGGCGGCCGT CCGATTCGCG TTGTTCCTGC CGGCGAGTGC GAACATCGTG
GCGATGGCTG TGGTCTTCCA GTACATCTTC GACAGCAGCC CCGACGGGCT GGCCAACACT
CTCGTCGGAT TCGTCGGCAT CGATCCGGTG AACTGGCTCG GTGACCGCGC CACCGCTCTC
CCGGTCGTCG CGCTGGTCGG TGGCTGGCGG CTGACCAGTT TCGTCTTCGT GGTCTATCTG
GCCGGCCTGA CCGCGATTCC GCGCTCGGTG TACGAGGCGG CCGACGTGGA CGGCGTCCGC
GGGCTCGCCC GGCTGCGCCA CGTCACGCTG CCGCTGCTGG CCCCGACGAC GGTGTTCCTG
GGGGTGTTCG TCACCGTCCT GACGTTGCAG ACGTTCGAGA CGGTCGCGGT GCTCACCGAT
GGCGGGCCCC TGGACTCCAG CACGACGATC ATCTACTACA TCTACAAGGT CGGTTTCACG
GGTTCGTTCC GGATCGGCTA CGCATCCATG ATCGCCCTGT TGCTGCTGGT CGCGGTGGTG
CTCGTCGGCG CGGCGGGAGC GCTGCTGGGC CGACGCGTCC GGATGGCCAG GCAGCTCGAC
GGCATGGGCG CCGAGGATCC CGTCGCCGAA GGAGGCCGGT CATGA
|
|---|
| Protein sequence | MAQGTRTGRD GWRAAALLTP AFVGLCVFVI GPAIVSAFVA GTDKNLTGPD FHWVGTANLR
EALADPDLGQ AVRNTLVYCL LTVIPSVLFG LLLALAAERV TRGRAAVRFA LFLPASANIV
AMAVVFQYIF DSSPDGLANT LVGFVGIDPV NWLGDRATAL PVVALVGGWR LTSFVFVVYL
AGLTAIPRSV YEAADVDGVR GLARLRHVTL PLLAPTTVFL GVFVTVLTLQ TFETVAVLTD
GGPLDSSTTI IYYIYKVGFT GSFRIGYASM IALLLLVAVV LVGAAGALLG RRVRMARQLD
GMGAEDPVAE GGRS
|
|---|
| |