Gene Rleg_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_3778 
Symbol 
ID8014607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp3832927 
End bp3833814 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content62% 
IMG OID644826341 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002977560 
Protein GI241206464 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0395577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAA ACTCTCATGA AAAGCGCGCC GAGCGGCAAT GGCTGCTGAT CCTGCTGCCC 
TCGCTGGTGC TGCTTCTGGC CTTCGTCATC TATCCGGCCC TCTATTCGAT CTATCTGAGC
TTCACCAATG AGGCGCTGAC CGGGGCTGCG GCCCTTCGGC CCCGTTTCGT CGGTTTCAGG
AACTATACGC GGCTCTTCAA CGACGCGAAG TTCTGGAATT CGCTGTTCGT CACCTTCGTC
TTCGTCATCG GTTCGGCGGT GATCGGCCAG TTCGTGCTCG GCCTGATCTC GGCAATTGCG
CTGCGCCGGC CGATCCGCTT TCGGCGGGTG TTCTCGTCGA TCATCCTGTT GCCGAACGCG
GCCCCTGAAG TCGTCGCCGG TTTCATGTGG ATCTCGATGC TGGCGGGCGG CGACAATGCC
ACACTCAGCC GCATCGTCAG CTTCTTCGGC ATCACGCCGG CCGACTGGCT GCAGGTCTTC
CCGCTGTCGA TGATCATTGT CGTCAACACC TGGCGCGGCA TCGCAACGGC GATGATCCTA
TTAACGGCCG GCCTCAGCAC CATTCCAGCG GAGATCTACG AGGCGGCCCG CATGGACGGC
GCGACACCGT CGCAGATGTT CCGACGCATC ACCCTGCCGC TGATGATGCC GACGATCCTG
CTCTATATGC TGATCTCGGC CGTCTCCACC ATCGCCGTCT TCGGTCTCGT CTATGCGCTG
ACGCGCGGCG GGCCGGGCGG GGCGACCGAG GTCGTCAGCA TCTATATCTA CAACCAGTCC
TTCACGGCGT TCCAGCTGGG CTATGGTGCT GCGGTCGCCG TCGTCGCGCT CGTCATCTCA
CTGATATTAG GTATCGCCTA TGTCCGGGCC ATGAAGGTGG AGGTCTGA
 
Protein sequence
MARNSHEKRA ERQWLLILLP SLVLLLAFVI YPALYSIYLS FTNEALTGAA ALRPRFVGFR 
NYTRLFNDAK FWNSLFVTFV FVIGSAVIGQ FVLGLISAIA LRRPIRFRRV FSSIILLPNA
APEVVAGFMW ISMLAGGDNA TLSRIVSFFG ITPADWLQVF PLSMIIVVNT WRGIATAMIL
LTAGLSTIPA EIYEAARMDG ATPSQMFRRI TLPLMMPTIL LYMLISAVST IAVFGLVYAL
TRGGPGGATE VVSIYIYNQS FTAFQLGYGA AVAVVALVIS LILGIAYVRA MKVEV