More than 300 homologs were found in PanDaTox collection
for query gene Franean1_7038 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_7038  binding-protein-dependent transport systems inner membrane component  100 
 
 
309 aa  613  9.999999999999999e-175  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  55.24 
 
 
320 aa  328  6e-89  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
314 aa  259  4e-68  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  45.22 
 
 
310 aa  258  6e-68  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_009654  Mmwyl1_0231  binding-protein-dependent transport systems inner membrane component  42.17 
 
 
359 aa  253  2.0000000000000002e-66  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3300  binding-protein-dependent transport systems inner membrane component  44.35 
 
 
374 aa  253  3e-66  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  41.32 
 
 
289 aa  223  4e-57  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  45.77 
 
 
312 aa  220  1.9999999999999999e-56  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  42.97 
 
 
294 aa  215  5.9999999999999996e-55  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
299 aa  213  1.9999999999999998e-54  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  38.81 
 
 
293 aa  213  4.9999999999999996e-54  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_1051  lactose transport system permease protein  41.14 
 
 
306 aa  211  1e-53  Synechococcus sp. CC9902  Bacteria  normal  0.390377  n/a   
 
 
-
 
NC_007516  Syncc9605_1449  lactose transport system permease protein  40.94 
 
 
290 aa  204  1e-51  Synechococcus sp. CC9605  Bacteria  normal  normal  0.0650773 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
306 aa  203  2e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  37.95 
 
 
321 aa  201  1.9999999999999998e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
295 aa  199  5e-50  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  38.04 
 
 
299 aa  197  2.0000000000000003e-49  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  37.17 
 
 
309 aa  196  3e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  40.07 
 
 
307 aa  196  5.000000000000001e-49  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
299 aa  194  2e-48  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_4236  binding-protein-dependent transport systems inner membrane component  40.71 
 
 
294 aa  193  2e-48  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4298  binding-protein-dependent transport systems inner membrane component  40.71 
 
 
294 aa  193  2e-48  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.200183 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  39.34 
 
 
313 aa  191  1e-47  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
295 aa  190  2e-47  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_013205  Aaci_0914  binding-protein-dependent transport systems inner membrane component  37.7 
 
 
310 aa  190  2.9999999999999997e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1168  binding-protein-dependent transport systems inner membrane component  38.56 
 
 
310 aa  190  2.9999999999999997e-47  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.155614  normal 
 
 
-
 
NC_010320  Teth514_0754  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
324 aa  190  2.9999999999999997e-47  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000204062  n/a   
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  39.26 
 
 
305 aa  189  4e-47  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
309 aa  189  5e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  37.92 
 
 
317 aa  189  7e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  36.54 
 
 
320 aa  188  1e-46  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
299 aa  188  1e-46  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
300 aa  186  4e-46  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
307 aa  186  4e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  38.05 
 
 
307 aa  186  4e-46  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_007413  Ava_4638  binding-protein dependent transport system inner membrane protein  36.3 
 
 
308 aa  186  5e-46  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.000000461706  normal  0.23331 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  36.39 
 
 
293 aa  186  6e-46  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  39.46 
 
 
353 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  39.48 
 
 
318 aa  184  1.0000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
279 aa  184  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  37.75 
 
 
305 aa  183  3e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  36.05 
 
 
293 aa  183  4.0000000000000006e-45  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  32.57 
 
 
308 aa  182  4.0000000000000006e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_014248  Aazo_4983  binding-protein-dependent transporter inner membrane protein  33.11 
 
 
310 aa  182  6e-45  'Nostoc azollae' 0708  Bacteria  normal  0.300856  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  32.7 
 
 
317 aa  182  6e-45  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
318 aa  182  9.000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
318 aa  181  1e-44  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  37.21 
 
 
316 aa  181  1e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
318 aa  180  2e-44  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
305 aa  180  2.9999999999999997e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.69 
 
 
288 aa  180  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  37.2 
 
 
316 aa  179  4e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_008541  Arth_1946  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
320 aa  179  5.999999999999999e-44  Arthrobacter sp. FB24  Bacteria  normal  0.305055  n/a   
 
 
-
 
NC_008820  P9303_15561  putative lactose transporter  40.16 
 
 
302 aa  179  8e-44  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.334934 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
298 aa  178  1e-43  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
293 aa  178  1e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  35.53 
 
 
306 aa  177  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
296 aa  177  3e-43  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  33.78 
 
 
300 aa  176  3e-43  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
296 aa  177  3e-43  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
315 aa  176  4e-43  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
328 aa  176  4e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  34.81 
 
 
321 aa  175  9e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  38.1 
 
 
294 aa  174  9.999999999999999e-43  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
314 aa  174  9.999999999999999e-43  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_013521  Sked_21160  carbohydrate ABC transporter membrane protein  37.19 
 
 
314 aa  174  9.999999999999999e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103465  normal  0.100515 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
294 aa  175  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
317 aa  175  9.999999999999999e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  35.89 
 
 
296 aa  174  1.9999999999999998e-42  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  35.99 
 
 
314 aa  174  1.9999999999999998e-42  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
316 aa  174  1.9999999999999998e-42  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  37.7 
 
 
306 aa  174  1.9999999999999998e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
307 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
293 aa  174  1.9999999999999998e-42  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3074  binding-protein-dependent transport systems inner membrane component  34.08 
 
 
314 aa  173  2.9999999999999996e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  36.33 
 
 
301 aa  173  3.9999999999999995e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
308 aa  172  6.999999999999999e-42  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
305 aa  172  6.999999999999999e-42  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
313 aa  172  7.999999999999999e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
296 aa  171  1e-41  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
321 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  35.1 
 
 
308 aa  171  1e-41  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
311 aa  170  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  36.55 
 
 
309 aa  171  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
310 aa  171  2e-41  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0143  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
402 aa  170  3e-41  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.91 
 
 
315 aa  169  5e-41  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
285 aa  169  6e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
288 aa  169  6e-41  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  34.83 
 
 
319 aa  169  7e-41  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
308 aa  168  8e-41  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  36.81 
 
 
315 aa  168  9e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_014212  Mesil_0285  binding-protein-dependent transport systems inner membrane component  36.74 
 
 
318 aa  167  1e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
294 aa  168  1e-40  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_4149  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
296 aa  168  1e-40  Opitutus terrae PB90-1  Bacteria  decreased coverage  0.00598191  normal  0.10352 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  34.84 
 
 
296 aa  168  1e-40  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
308 aa  168  1e-40  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
314 aa  167  2e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  34.49 
 
 
296 aa  167  2e-40  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
296 aa  167  2e-40  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
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