| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3300 |
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| Symbol | |
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| ID | 6162211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3667503 |
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| End bp | 3668627 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666075 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001792323 |
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| Protein GI | 171059974 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA CCCCGACCAT TCCCACGACG ACGCGTGCAC CCGGCGCGGC CAGCGCGCGC
CGTGCGGGCC TGCTCATGGT CTCGCCGGCC ATGCTGCTGA TGGGCCTGTT CCTGATCGTG
CCCTTCGTGC TCGCGTTCAC GATGTCGTTC ACCAACCAGC GGCTGGTGTC GCCCAATCCG
ACCCAGTTCG TCGGCCTGGA GAACTACCGC CAGATGCTCG GCCTGGGCGT GCTGGTGCTC
GAACCCGAGA AGGACGCACA AGGCGCCATC GCCCGCGAGG CCGATGGCAG CCCCACCTAT
CCGGGCCTGC GCCAGTTCAC CCGCGACAAC CCCGACTACC CGCACCTGGA CCGCAAGCGC
GAGTGGTTCC ACCTCGACTG GACCGGCGAC AGCCGCCTCT ACGTGCTGGC CAGCGACGTG
ATCTTCATGA AGGCGCTGGT CAACACGGTG CTGTTCGTGG TGGTGGTGGC GCCGGTGCAG
GCCCTGCTGG CGCTGCTGCT GGCGATGCTG ATCAACCAGC CGCTGCGCGG CATCAACGTC
TTTCGCACCA TCTACTTCAT GCCGGTGGTG ATCTCGATGG TGGTGGTCGC CTTCCTGTGG
CGCTTCATCT ATGCCGGCGA CAACGGCCTG CTGAACTCGC TGCTGCAGCA GCTGACCTTC
GGCGCCTTCC AGCCGGTCGA CTGGCTGGGC CAGCCCGGCA CCGCACTGTG GGCCATCATG
GCGATGTCGG TCTGGCAGGG CGTGGGCTTC CACATGATCG TCTGGCTGTC GGGGCTGCAG
ACGATTCCCG CCTCGCTGTA CGAGGCCGCC GCGCTCGAAG GCGCGTCGAA GTGGCAGGTC
TTCCGCTACG TCACCTGGCC GGGCCTGCGC AACACCGCGA TCCTGGTGAT GGTCGTCATC
ACGATGCAGG CCTTCACGCT CTACCCGCAG ATCGACGTGA TGACGCGCGG CGGCCCGCTC
GACTCGACCC AGTCGCTGGT CTTCCAGGCG GTGCAGCGCG GCTACGGCAA GCAGGACATC
GCCGGCGGCT CCGCGATCAG CGTCTTCCTG TTCCTGTTCG TGCTGGCGAT CTCGCTGGGC
CAACGCTGGC TGACGCGGGA ACGCCAGGTC GACAAGAGCC ACTGA
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| Protein sequence | MTQTPTIPTT TRAPGAASAR RAGLLMVSPA MLLMGLFLIV PFVLAFTMSF TNQRLVSPNP
TQFVGLENYR QMLGLGVLVL EPEKDAQGAI AREADGSPTY PGLRQFTRDN PDYPHLDRKR
EWFHLDWTGD SRLYVLASDV IFMKALVNTV LFVVVVAPVQ ALLALLLAML INQPLRGINV
FRTIYFMPVV ISMVVVAFLW RFIYAGDNGL LNSLLQQLTF GAFQPVDWLG QPGTALWAIM
AMSVWQGVGF HMIVWLSGLQ TIPASLYEAA ALEGASKWQV FRYVTWPGLR NTAILVMVVI
TMQAFTLYPQ IDVMTRGGPL DSTQSLVFQA VQRGYGKQDI AGGSAISVFL FLFVLAISLG
QRWLTRERQV DKSH
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