More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0828 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  100 
 
 
316 aa  618  1e-176  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  68.15 
 
 
325 aa  408  1e-113  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  65.73 
 
 
321 aa  403  1e-111  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  50.51 
 
 
320 aa  308  6.999999999999999e-83  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  42.24 
 
 
306 aa  213  4.9999999999999996e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  39.24 
 
 
317 aa  208  1e-52  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
292 aa  200  3e-50  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
298 aa  199  6e-50  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.9 
 
 
313 aa  197  2.0000000000000003e-49  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.41 
 
 
299 aa  196  5.000000000000001e-49  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  41.49 
 
 
316 aa  196  6e-49  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  38.08 
 
 
316 aa  194  1e-48  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  36.46 
 
 
293 aa  194  1e-48  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
293 aa  194  1e-48  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  38.57 
 
 
320 aa  192  5e-48  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
313 aa  191  2e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  35.33 
 
 
321 aa  189  5.999999999999999e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
293 aa  188  1e-46  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  39.64 
 
 
307 aa  187  3e-46  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  39.64 
 
 
307 aa  187  3e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  38.33 
 
 
287 aa  185  8e-46  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
318 aa  185  1.0000000000000001e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
292 aa  185  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013172  Bfae_30860  permease component of ABC-type sugar transporter  36.71 
 
 
350 aa  184  1.0000000000000001e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.99166  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  36.07 
 
 
294 aa  185  1.0000000000000001e-45  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  37.94 
 
 
308 aa  184  2.0000000000000003e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
318 aa  182  7e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  38.43 
 
 
316 aa  181  1e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
317 aa  180  2e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  37.06 
 
 
294 aa  180  2.9999999999999997e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
291 aa  179  4.999999999999999e-44  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
292 aa  179  5.999999999999999e-44  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  35.89 
 
 
300 aa  179  8e-44  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  36.62 
 
 
314 aa  178  1e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
305 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
317 aa  176  4e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
292 aa  176  6e-43  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  33.76 
 
 
321 aa  175  8e-43  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
315 aa  175  8e-43  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
316 aa  175  9.999999999999999e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
306 aa  175  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
300 aa  174  1.9999999999999998e-42  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
315 aa  174  1.9999999999999998e-42  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
317 aa  174  1.9999999999999998e-42  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  34.14 
 
 
293 aa  173  2.9999999999999996e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
318 aa  173  2.9999999999999996e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
309 aa  173  2.9999999999999996e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.1 
 
 
315 aa  172  5.999999999999999e-42  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
309 aa  171  1e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
353 aa  171  1e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  35.97 
 
 
318 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
298 aa  171  2e-41  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
283 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
314 aa  171  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
305 aa  171  2e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
325 aa  171  2e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  33.81 
 
 
315 aa  170  3e-41  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  38.13 
 
 
310 aa  170  3e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
316 aa  170  3e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
294 aa  169  4e-41  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
296 aa  169  4e-41  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
285 aa  169  6e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
308 aa  169  6e-41  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  34.75 
 
 
310 aa  169  7e-41  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
308 aa  169  8e-41  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_07470  carbohydrate ABC transporter membrane protein  36.73 
 
 
304 aa  168  9e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
294 aa  168  1e-40  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  35.79 
 
 
322 aa  168  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  34.75 
 
 
310 aa  168  1e-40  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  36.52 
 
 
310 aa  167  2e-40  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  34.75 
 
 
310 aa  167  2e-40  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  34.75 
 
 
310 aa  167  2e-40  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_1752  binding-protein-dependent transport systems inner membrane component  34.31 
 
 
314 aa  167  2e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000089983 
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  36.52 
 
 
310 aa  167  2e-40  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
310 aa  167  2e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  36.27 
 
 
305 aa  167  2.9999999999999998e-40  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_2801  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
288 aa  167  2.9999999999999998e-40  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.254018  n/a   
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  34.75 
 
 
310 aa  166  4e-40  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
318 aa  166  5.9999999999999996e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
305 aa  166  5.9999999999999996e-40  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  34.43 
 
 
310 aa  165  8e-40  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  34.43 
 
 
310 aa  165  8e-40  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  38.6 
 
 
294 aa  165  9e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  36.27 
 
 
307 aa  165  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
309 aa  165  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
311 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.27 
 
 
318 aa  165  1.0000000000000001e-39  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  35.22 
 
 
311 aa  164  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  35.69 
 
 
309 aa  164  2.0000000000000002e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
307 aa  164  2.0000000000000002e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_012880  Dd703_0715  binding-protein-dependent transport systems inner membrane component  36.42 
 
 
333 aa  163  4.0000000000000004e-39  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
293 aa  163  4.0000000000000004e-39  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  34.4 
 
 
321 aa  163  4.0000000000000004e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  33.21 
 
 
310 aa  163  4.0000000000000004e-39  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.02 
 
 
316 aa  162  5.0000000000000005e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0524  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
303 aa  162  5.0000000000000005e-39  Petrotoga mobilis SJ95  Bacteria  normal  0.693678  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  35.21 
 
 
300 aa  162  6e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_15070  permease component of ABC-type sugar transporter  35.85 
 
 
311 aa  162  6e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0771026  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
308 aa  162  6e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  33.69 
 
 
316 aa  162  8.000000000000001e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
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