160 homologs were found in PanDaTox collection
for query gene Slin_0851 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_0851  putative transcriptional regulator, Crp/Fnr family  100 
 
 
199 aa  413  1e-114  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6003  putative transcriptional regulator, Crp/Fnr family  52.66 
 
 
196 aa  215  4e-55  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2876  cyclic nucleotide binding regulatory protein  35.48 
 
 
202 aa  128  4.0000000000000003e-29  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.132112  decreased coverage  0.0000795763 
 
 
-
 
NC_013132  Cpin_1390  putative transcriptional regulator, Crp/Fnr family  32.09 
 
 
208 aa  117  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_0397  cyclic nucleotide binding regulatory protein  37.5 
 
 
185 aa  115  5e-25  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.081454  normal  0.179633 
 
 
-
 
NC_009441  Fjoh_1392  cyclic nucleotide-binding protein  31.89 
 
 
193 aa  115  5e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0639788  n/a   
 
 
-
 
NC_009441  Fjoh_4533  cyclic nucleotide-binding protein  35.14 
 
 
186 aa  111  6e-24  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1123  cyclic nucleotide binding regulatory protein  35.06 
 
 
185 aa  110  1.0000000000000001e-23  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.223037  normal 
 
 
-
 
NC_008255  CHU_1116  cyclic nucleotide binding regulatory protein  35.64 
 
 
196 aa  108  4.0000000000000004e-23  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.221174  normal 
 
 
-
 
NC_009441  Fjoh_3107  cyclic nucleotide-binding protein  31.96 
 
 
208 aa  108  4.0000000000000004e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2568  putative transcriptional regulator, Crp/Fnr family  31.66 
 
 
227 aa  106  2e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.560798  normal 
 
 
-
 
NC_013162  Coch_1592  cyclic nucleotide-binding protein  33.51 
 
 
192 aa  106  3e-22  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.619308  n/a   
 
 
-
 
NC_013132  Cpin_7034  putative transcriptional regulator, Crp/Fnr family  32.29 
 
 
195 aa  105  6e-22  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000265791  normal 
 
 
-
 
NC_013132  Cpin_2316  putative transcriptional regulator, Crp/Fnr family  36.22 
 
 
191 aa  103  1e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.144016  normal 
 
 
-
 
NC_009441  Fjoh_3085  cyclic nucleotide-binding protein  32.42 
 
 
190 aa  103  2e-21  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4194  putative transcriptional regulator, Crp/Fnr family  32.62 
 
 
194 aa  103  2e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.153014  normal  0.0498746 
 
 
-
 
NC_010184  BcerKBAB4_1138  cyclic nucleotide-binding protein  33.33 
 
 
191 aa  103  2e-21  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0914153  n/a   
 
 
-
 
NC_013730  Slin_2747  putative transcriptional regulator, Crp/Fnr family  35.26 
 
 
187 aa  103  2e-21  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.000105998 
 
 
-
 
NC_013730  Slin_2727  putative transcriptional regulator, Crp/Fnr family  35.08 
 
 
197 aa  102  3e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0503116 
 
 
-
 
NC_013730  Slin_3830  putative transcriptional regulator, Crp/Fnr family  34.78 
 
 
201 aa  102  3e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.695222 
 
 
-
 
NC_007413  Ava_1692  cyclic nucleotide-binding protein  34.92 
 
 
196 aa  102  4e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2093  putative transcriptional regulator, Crp/Fnr family  36.04 
 
 
198 aa  102  5e-21  Spirosoma linguale DSM 74  Bacteria  normal  0.177732  normal  0.144661 
 
 
-
 
NC_014230  CA2559_10168  hypothetical protein  32.8 
 
 
189 aa  101  8e-21  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.578038  n/a   
 
 
-
 
NC_013037  Dfer_0777  putative transcriptional regulator, Crp/Fnr family  32.07 
 
 
198 aa  101  8e-21  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.438607  normal  0.285853 
 
 
-
 
NC_013132  Cpin_1544  putative transcriptional regulator, Crp/Fnr family  33.33 
 
 
194 aa  100  1e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4424  cyclic nucleotide-binding protein  31.32 
 
 
190 aa  99.8  2e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1286  cyclic nucleotide binding regulatory protein  31.18 
 
 
190 aa  98.2  7e-20  Bacillus cereus B4264  Bacteria  normal  0.0475736  n/a   
 
 
-
 
NC_008255  CHU_0226  cyclic nucleotide binding regulatory protein  32.48 
 
 
187 aa  95.5  5e-19  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0203534 
 
 
-
 
NC_009441  Fjoh_0475  cyclic nucleotide-binding protein  31.38 
 
 
189 aa  92.4  4e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5649  putative transcriptional regulator, Crp/Fnr family  32.7 
 
 
204 aa  91.7  6e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.455016 
 
 
-
 
NC_013132  Cpin_2485  putative transcriptional regulator, Crp/Fnr family  29.19 
 
 
189 aa  91.3  8e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.497978 
 
 
-
 
NC_013037  Dfer_0431  putative transcriptional regulator, Crp/Fnr family  35.37 
 
 
198 aa  90.5  1e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.7621  normal 
 
 
-
 
NC_013132  Cpin_6710  putative transcriptional regulator, Crp/Fnr family  31.41 
 
 
189 aa  90.9  1e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3814  cyclic nucleotide-binding protein  30.1 
 
 
195 aa  90.1  2e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2178  putative transcriptional regulator, Crp/Fnr family  32.61 
 
 
189 aa  89  4e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0933  cyclic nucleotide-binding protein  35.84 
 
 
175 aa  89  4e-17  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.0517277  n/a   
 
 
-
 
NC_013132  Cpin_3646  putative transcriptional regulator, Crp/Fnr family  31.94 
 
 
200 aa  88.6  5e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0908146  normal  0.454676 
 
 
-
 
NC_009972  Haur_2655  cyclic nucleotide-binding protein  36.13 
 
 
196 aa  88.2  7e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.964381  n/a   
 
 
-
 
NC_013730  Slin_1635  putative transcriptional regulator, Crp/Fnr family  33.74 
 
 
193 aa  87.8  9e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3995  cyclic nucleotide-binding protein  28.87 
 
 
205 aa  86.7  2e-16  Saccharophagus degradans 2-40  Bacteria  normal  0.0432337  normal 
 
 
-
 
NC_008255  CHU_1452  cyclic nucleotide binding regulatory protein  29.73 
 
 
192 aa  87  2e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.177546  normal  0.82146 
 
 
-
 
NC_008255  CHU_2485  cyclic nucleotide binding regulatory protein  30 
 
 
188 aa  86.3  2e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00499605  decreased coverage  0.00906372 
 
 
-
 
NC_009441  Fjoh_2567  cyclic nucleotide-binding protein  28.65 
 
 
189 aa  86.7  2e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5637  putative transcriptional regulator, Crp/Fnr family  32.47 
 
 
189 aa  86.7  2e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236441  normal  0.598189 
 
 
-
 
NC_013132  Cpin_3585  putative transcriptional regulator, Crp/Fnr family  31.87 
 
 
191 aa  86.3  2e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0241751 
 
 
-
 
NC_013132  Cpin_6650  putative transcriptional regulator, Crp/Fnr family  29.61 
 
 
196 aa  86.7  2e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6712  putative transcriptional regulator, Crp/Fnr family  28.1 
 
 
194 aa  86.3  3e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3827  cyclic nucleotide-binding protein  30.57 
 
 
188 aa  86.3  3e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  0.547464  n/a   
 
 
-
 
NC_009441  Fjoh_2842  cyclic nucleotide-binding protein  27.53 
 
 
191 aa  85.9  4e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  0.814111  n/a   
 
 
-
 
NC_009441  Fjoh_3955  cyclic nucleotide-binding protein  29.26 
 
 
200 aa  85.9  4e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5018  putative transcriptional regulator, Crp/Fnr family  29.1 
 
 
194 aa  85.1  7e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.213439  normal  0.0399909 
 
 
-
 
NC_013730  Slin_2881  putative transcriptional regulator, Crp/Fnr family  32.91 
 
 
187 aa  84.7  9e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_10488  hypothetical protein  26.84 
 
 
194 aa  84  0.000000000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.497163  n/a   
 
 
-
 
NC_013132  Cpin_1758  putative transcriptional regulator, Crp/Fnr family  29.19 
 
 
199 aa  84  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.972019  normal 
 
 
-
 
NC_013132  Cpin_4002  putative transcriptional regulator, Crp/Fnr family  34.84 
 
 
187 aa  83.6  0.000000000000002  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.000843344  normal  0.0193683 
 
 
-
 
NC_009092  Shew_2699  cyclic nucleotide-binding protein  30.96 
 
 
192 aa  83.2  0.000000000000002  Shewanella loihica PV-4  Bacteria  normal  0.378618  normal  0.0569969 
 
 
-
 
NC_008255  CHU_0678  cyclic nucleotide binding-regulatory protein  30.1 
 
 
193 aa  82.8  0.000000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5714  putative transcriptional regulator, Crp/Fnr family  28.8 
 
 
194 aa  83.2  0.000000000000003  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00341706 
 
 
-
 
NC_009441  Fjoh_4303  cyclic nucleotide-binding protein  29.26 
 
 
201 aa  82.4  0.000000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  0.814789  n/a   
 
 
-
 
NC_013132  Cpin_3466  putative transcriptional regulator, Crp/Fnr family  28.57 
 
 
196 aa  82.4  0.000000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.118195 
 
 
-
 
NC_013061  Phep_4254  cyclic nucleotide-binding  33.76 
 
 
189 aa  82  0.000000000000005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.908363  normal 
 
 
-
 
NC_013037  Dfer_5568  putative transcriptional regulator, Crp/Fnr family  31.14 
 
 
189 aa  81.6  0.000000000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.549141 
 
 
-
 
NC_009441  Fjoh_4064  cyclic nucleotide-binding protein  26.09 
 
 
189 aa  79  0.00000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1763  putative transcriptional regulator, Crp/Fnr family  29.47 
 
 
194 aa  78.6  0.00000000000005  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.000000036343  normal  0.326349 
 
 
-
 
NC_008255  CHU_2257  cyclic nucleotide binding regulatory protein  32.09 
 
 
190 aa  77  0.0000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0921421  normal 
 
 
-
 
NC_009441  Fjoh_3217  cyclic nucleotide-binding protein  29.19 
 
 
189 aa  77.4  0.0000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.336611  n/a   
 
 
-
 
NC_009441  Fjoh_3733  cyclic nucleotide-binding protein  27.27 
 
 
213 aa  77.4  0.0000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.263018  n/a   
 
 
-
 
NC_009441  Fjoh_0028  cyclic nucleotide-binding protein  28.11 
 
 
190 aa  77  0.0000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1942  cyclic nucleotide binding regulatory protein  28.34 
 
 
191 aa  76.3  0.0000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0673232  normal  0.0303448 
 
 
-
 
NC_013730  Slin_3834  putative transcriptional regulator, Crp/Fnr family  27.53 
 
 
191 aa  76.3  0.0000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1388  cyclic nucleotide-binding protein  31.93 
 
 
203 aa  76.3  0.0000000000003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1290  putative transcriptional regulator, Crp/Fnr family  28.57 
 
 
197 aa  75.9  0.0000000000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.981443  normal  0.710013 
 
 
-
 
NC_013037  Dfer_1119  putative transcriptional regulator, Crp/Fnr family  29.19 
 
 
200 aa  75.9  0.0000000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.301792  normal  0.283785 
 
 
-
 
NC_013132  Cpin_4629  putative transcriptional regulator, Crp/Fnr family  28.65 
 
 
194 aa  75.1  0.0000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.483165  normal  0.202471 
 
 
-
 
NC_008255  CHU_2540  cyclic nucleotide binding regulatory protein  24.6 
 
 
211 aa  75.1  0.0000000000007  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.90473  normal 
 
 
-
 
NC_013162  Coch_0532  cyclic nucleotide-binding protein  27.81 
 
 
189 aa  75.1  0.0000000000007  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1379  putative transcriptional regulator, Crp/Fnr family  28.96 
 
 
187 aa  74.7  0.0000000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1586  hypothetical protein  30.3 
 
 
200 aa  74.3  0.000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_2895  putative transcriptional regulator, Crp/Fnr family  27.23 
 
 
194 aa  73.9  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_0358  putative transcriptional regulator, Crp/Fnr family  31.25 
 
 
192 aa  74.3  0.000000000001  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.00654303  normal  0.458224 
 
 
-
 
NC_013132  Cpin_2676  putative transcriptional regulator, Crp/Fnr family  26.7 
 
 
192 aa  73.6  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.320981  normal 
 
 
-
 
NC_013132  Cpin_4453  putative transcriptional regulator, Crp/Fnr family  28.42 
 
 
195 aa  73.6  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0381566  normal  0.0628964 
 
 
-
 
NC_008255  CHU_1090  cyclic nucleotide binding regulatory protein  30.29 
 
 
191 aa  73.6  0.000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.171648 
 
 
-
 
NC_013132  Cpin_5404  putative transcriptional regulator, Crp/Fnr family  27.32 
 
 
184 aa  73.2  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.243298  normal  0.0626579 
 
 
-
 
NC_009441  Fjoh_3294  cyclic nucleotide-binding protein  30.56 
 
 
187 aa  73.6  0.000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4057  cyclic nucleotide-binding  28.27 
 
 
196 aa  73.9  0.000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.116691  normal 
 
 
-
 
NC_009441  Fjoh_3193  cyclic nucleotide-binding protein  28.31 
 
 
192 aa  72.8  0.000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2731  cyclic nucleotide-binding domain-containing protein  30.67 
 
 
192 aa  72.8  0.000000000004  Colwellia psychrerythraea 34H  Bacteria  normal  0.19887  n/a   
 
 
-
 
NC_008228  Patl_2773  cyclic nucleotide-binding protein  24.61 
 
 
198 aa  72.4  0.000000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.724509  n/a   
 
 
-
 
NC_008255  CHU_2259  cyclic nucleotide binding regulatory protein  29.26 
 
 
208 aa  72  0.000000000006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0503  cyclic nucleotide-binding protein  28.16 
 
 
197 aa  72  0.000000000006  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_001710  cAMP-binding protein  30.86 
 
 
192 aa  71.6  0.000000000007  Vibrio sp. Ex25  Bacteria  normal  0.689486  n/a   
 
 
-
 
NC_013061  Phep_1779  cyclic nucleotide-binding  29.95 
 
 
192 aa  71.6  0.000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.705859  normal  0.0224927 
 
 
-
 
NC_013132  Cpin_0260  putative transcriptional regulator, Crp/Fnr family  26.18 
 
 
216 aa  70.9  0.00000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_3164  cyclic nucleotide-binding protein  28.98 
 
 
199 aa  69.7  0.00000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1677  cyclic nucleotide binding regulatory protein  27.92 
 
 
175 aa  70.1  0.00000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.24852  normal 
 
 
-
 
NC_009441  Fjoh_3131  cyclic nucleotide-binding protein  27.53 
 
 
168 aa  70.1  0.00000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.905779  n/a   
 
 
-
 
NC_009783  VIBHAR_00763  hypothetical protein  34 
 
 
190 aa  69.7  0.00000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_2686  putative transcriptional regulator, Crp/Fnr family  30.53 
 
 
195 aa  69.7  0.00000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0302  putative transcriptional regulator, Crp/Fnr family  27.87 
 
 
189 aa  69.3  0.00000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
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