Gene Cpin_6712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6712 
Symbol 
ID8362903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8405906 
End bp8406490 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content41% 
IMG OID644968844 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003126314 
Protein GI256425661 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTCC ATTTCAGAAA TAAATTTCCC CGCCTGAATA TCTACTGGGA TAAATATCTG 
GAATTTCAGC AGCGGCTGGA TGTTCCGGCC AAAACGATCT TACTCGATGA AGGCAAAATA
TCACAGCACT ATATTTATAT TGAAAAGGGT TGTGTAAGAA GTTATTTCAA CAAAAACGGA
GAAGACAAAA CCGTACAATT CTTTTTCGAA GAAGAAGGTT TAAGTTCGCT GGATAGCTTT
GTGAATAACC TGCCCAGCCA GTTTACTATT GAAACCATCG AACCATCTGT TATTTACTTA
TTGCCCAAAC AGTATGTATC GCAATTGATC GCAGAACTCA GTAATGAGCC CGACTTCACA
CAGATGATAT TATACATGTC CGCGCAAAGG CAAACGCACT ACATCAACGA ATTTGTGTCT
TTTATCCGCG ATACGCCGGA AGAACGTTAT CAGCATCTGC TGCAGGAGCG GCCACATATC
GTACAAAGGG TACCACAACA TTATATCGCC TCTTATCTGG GTGTCAGCAC CGTACATCTC
AGCCGGATTA AAAGCAAACT GGCTAAAGGG AAAACCCATT TCTGA
 
Protein sequence
MFFHFRNKFP RLNIYWDKYL EFQQRLDVPA KTILLDEGKI SQHYIYIEKG CVRSYFNKNG 
EDKTVQFFFE EEGLSSLDSF VNNLPSQFTI ETIEPSVIYL LPKQYVSQLI AELSNEPDFT
QMILYMSAQR QTHYINEFVS FIRDTPEERY QHLLQERPHI VQRVPQHYIA SYLGVSTVHL
SRIKSKLAKG KTHF