| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2093 |
|---|
| Symbol | |
|---|
| ID | 8725831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2524692 |
|---|
| End bp | 2525288 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003386931 |
|---|
| Protein GI | 284037001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.177732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.144661 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCAGG ATTGGGTTGC TATGCGGATG GCATTTAACC AGTTAGTGCC CATTTCTGAT
GAGGTATGGG AGGCTGTGCT CGCCATTGCT CACCCAACCA CCTACAAAAA GAAACGCATT
CTGCTGGAAC CGGGCCAGGT CTGCGACCGG ATGCAGTTTA TTCACCAGGG GGCCATACGG
TCATATCGTA TTCTGGAAGG GGTGGACATT ACGTACTTTT TTTTCTTCCC CGATTCGTTT
GCCTTTGCTA CGGACTTTGC CAGTTTCAAA ACCGATTTAC CCTCTCACTA TTACCTCGAG
TGTATTGACG ACTGCCAGGT AACAACGTTC TACCGCTCTG ACATTTACGA TTTATACGAA
CGATATCCGC AAATGCAAAA ATTCGGTCGG TTAATGGCTG AATATGCGTA CCTGATGATG
GATCGCCGGA TGAGTCACTT TCAGTTTCAT AACCTGGAAA CCCGTTATCT AGCTTTGTTA
GAGGAGGAAC CAGCCTTGCT CCAGCGAGTG CCTCAGCAAT TGATCGCTAC TTATTTAGGC
GTAACACCCG AGAGTTTAAG CCGGGTCAAA CAACAAGTTG CCCGCCTGAA AAAATAG
|
|---|
| Protein sequence | MHQDWVAMRM AFNQLVPISD EVWEAVLAIA HPTTYKKKRI LLEPGQVCDR MQFIHQGAIR
SYRILEGVDI TYFFFFPDSF AFATDFASFK TDLPSHYYLE CIDDCQVTTF YRSDIYDLYE
RYPQMQKFGR LMAEYAYLMM DRRMSHFQFH NLETRYLALL EEEPALLQRV PQQLIATYLG
VTPESLSRVK QQVARLKK
|
|---|
| |