| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7034 |
|---|
| Symbol | |
|---|
| ID | 8363226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8798862 |
|---|
| End bp | 8799449 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644969167 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003126636 |
|---|
| Protein GI | 256425983 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000265791 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA TGGAATTGCT GGAAAAGACA CTTAGCGCCT TTGCGGGAAT GCCTGCAAAG
GACTTCGCTA TGTCTTTACC TAACTGGCAA CTGAGGGAAT ATAAGAAGGG AGAATTTTAC
AATGAGTATA AGAACGTATG TAAGCACCTG GGATTTATTA TCAGTGGTGT ATTCAGAACA
TACCATGTCA ATATAGAGAC GGGCGAGGAG AAAAACCTGC TTTTTTTCAG TGAAAAGCAA
TTCGTAGCGT CGTACAAGAG TTTTCTGACG CAGACACCTT GTAATTATTA CACAGAATCT
TTAGTAGATT CGTCTATTCT GTATATACAT ATCGATGACC TGAACAGGTT ATATTCGGAA
TCGCATCAGT GGGAGCGTTT TGGCAGATTT ATAGCAGAAC TTGCGTTTAA TGAGGTGATG
GACCATACGG AGGATATGAT GTTCAAGACG CCTGAACAGC GTTATCAGCA GATGCTGGAG
CGGCATCCTG GCATATTTAA CAGTGTACCT TTATATCATA TTGCTTCATA CCTGGGTATC
CAGGGGCCAT CATTGAGTCG TATACGGAAA CGCCTTTCCG GGAAATAA
|
|---|
| Protein sequence | MTEMELLEKT LSAFAGMPAK DFAMSLPNWQ LREYKKGEFY NEYKNVCKHL GFIISGVFRT
YHVNIETGEE KNLLFFSEKQ FVASYKSFLT QTPCNYYTES LVDSSILYIH IDDLNRLYSE
SHQWERFGRF IAELAFNEVM DHTEDMMFKT PEQRYQQMLE RHPGIFNSVP LYHIASYLGI
QGPSLSRIRK RLSGK
|
|---|
| |