Gene Cpin_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2895 
Symbol 
ID8359056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3575683 
End bp3576267 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content38% 
IMG OID644965075 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003122575 
Protein GI256421922 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT TGATTGAATA CCTATTGCAA TTTGGCGCCC TTGACAGCGA CCAAATTCAA 
TTTATTTCCA ATAAAGGGAA AGTGGTGACG CTGGTGACAA ATGAATATTT CTCAGAAGCG
GGAAAGACAC CTAAGTATGT CGGTTTTATT CTTAAAGGTA TTTTTCGGAC TTGTTTCTAT
AATAACAAGG GCGATGATAT TACGCATGAT TTTATTGATG AGAATAATTT CGTCACCGAT
ATGCAAAAGT TCGAAGCACA AGCTGTTGCC ACTGAATATA TACAGGCAAT TACCGACTGT
GAGGTGATCG TTTTTACGAA GAAAGACTGG GATGACATTG GCAAAACCAT TGCTAATTGG
GATGCCATTA CCGGGCTAAT ATTAAGAAAA TGTATCGGAG AAATTTTAGA AAGAAGAAAC
TTTCTGGTGA CAGGAGATGC AACTGCCCGT TATATATCAT TTATGAAAAA GTTTCCGACT
TTCATTAATC GTATTCCGCT TTCGTATATC GCGTCCTATT TGGGAATGGC ACAACCCTCC
CTTAGCAGGA TCCGAAAAAA TATCAGCGAG AAAAACGCTT TTTAG
 
Protein sequence
MDKLIEYLLQ FGALDSDQIQ FISNKGKVVT LVTNEYFSEA GKTPKYVGFI LKGIFRTCFY 
NNKGDDITHD FIDENNFVTD MQKFEAQAVA TEYIQAITDC EVIVFTKKDW DDIGKTIANW
DAITGLILRK CIGEILERRN FLVTGDATAR YISFMKKFPT FINRIPLSYI ASYLGMAQPS
LSRIRKNISE KNAF