Gene CHU_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1677 
Symbol 
ID4186538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1964646 
End bp1965173 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content38% 
IMG OID638071671 
Productcyclic nucleotide binding regulatory protein 
Protein accessionYP_678287 
Protein GI110638078 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.24852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATA TTCTAGCCGG ACTTTTCAAC CAGGAAATCA GTATAGGACC CAAAAGTTTC 
CTGATTGAAG CAGGTGAAAC ATCTGACAGG TTCTATTACT TAAAAAAAGG AATTGTTCGG
TTCTGGCATA TGAGCAATGA TAAAGAAACG ACTACACAAC TGCTTTTTGA GGGCAAGTCG
TTTACATCCA TAGAATCGTT TTTATTTAAT GAGCCCAGTA TTTTTAATAT TGAAACAATT
GATGCCTGCG AGCTGACATA CATTACAAAA GCAGATTTTG ATGCGTTTCT AACAGCACAT
GCAGATCTGA AAGATGCTGT ATACCATAAG ATTATCCACA ATGTGGTGCT TAATTCCAGA
AGAATTTATT CCTTAATGAC CACCAAACCC GAAGAGCGTT ACTGTGAACT GGTAAAAACA
TATCCGGAGC TGATCAGCAA AGTACCGCAG CATATTATTG CATCGTACCT GGGCATTACA
ACGGTATCGT TAAGCAGAAT CAAAAGCCGG ACAACCAAAG ACGAATAA
 
Protein sequence
MKDILAGLFN QEISIGPKSF LIEAGETSDR FYYLKKGIVR FWHMSNDKET TTQLLFEGKS 
FTSIESFLFN EPSIFNIETI DACELTYITK ADFDAFLTAH ADLKDAVYHK IIHNVVLNSR
RIYSLMTTKP EERYCELVKT YPELISKVPQ HIIASYLGIT TVSLSRIKSR TTKDE