| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0933 |
|---|
| Symbol | |
|---|
| ID | 8367352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1087993 |
|---|
| End bp | 1088520 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644983358 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_003141049 |
|---|
| Protein GI | 256819770 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0517277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTAA ACCTCGATTT CCTCAGTCAG TATTTTACTG AAGTACATTT TGATAAAGAT
GCCCTCATCA CCCGTGCAGG CGACGTGGAG CACTCGCTCT ATTACCTCAG CGAGGGTATC
GTGCGCTTTT TCTACTACAA CCCCACAACC GACAAGGAAA CGACGGTGGA TATTCTTTTT
GCTGAGCAGT TTTTTATGTC GTATGCCTCG TTTGTAAAGC GTGAACCTTC TCTCTTCTCT
ATTCAAGCGC TCAAAGAGGT TACTGCCTAT AAAATAGGGC GTGAACACCT GGAACACCTC
ATAGAACAGC AAGAATACTT ACAAATAAAA GCTGATATTT TGGAGCATCT GCTGATTGAG
AAAATGCAAC GAGAGGCGCA ATTCTTATTG CAATCACCGG AGGAGATTTA CTGCAATCTA
TTGGAAAAAG ACCCTAAACT TATCCAAAAT ATTCCGCTGA AATATATTGC TTCTTATATT
GGCATCACTC CCCAAGCGCT GAGCAGAATT AGGAAAAGAA TATTTTAA
|
|---|
| Protein sequence | MTLNLDFLSQ YFTEVHFDKD ALITRAGDVE HSLYYLSEGI VRFFYYNPTT DKETTVDILF
AEQFFMSYAS FVKREPSLFS IQALKEVTAY KIGREHLEHL IEQQEYLQIK ADILEHLLIE
KMQREAQFLL QSPEEIYCNL LEKDPKLIQN IPLKYIASYI GITPQALSRI RKRIF
|
|---|
| |