Gene CHU_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0678 
Symbolfnr 
ID4184087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp778164 
End bp778745 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content40% 
IMG OID638070684 
Productcyclic nucleotide binding-regulatory protein 
Protein accessionYP_677305 
Protein GI110637098 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACG CATTACGAGC TTATATTGAA AAGTATGCAT CCGAAAAAAT ATCCGATGCG 
GATTTTGAAG AGGTCAAAAA AGCGTTCACA TTTAAGCGTT ATAAAAAAGG TCAGTTTTTA
TTGCAGGAAG GTGAAGTATC TAAATATACC GCATTTGTTT TAAAAGGCTC CATGCGACAG
TATTCTGTAG ATGCAAAAGG AACGGAACAC ATCATACATT TTGGCATTGA AAACTGGTGG
GTTGGAGATC GTGAAAGTTC AACCATGCTT ACGCCCTCTA ACTATAACAT TGATGCCATT
GAAGATACAG AAGTACTTTT AACAACCTCC GAAGATCTGC AGCAATTAAC CGCTGCATTA
CCTGTTATTG GCAAGATGGT TAACACTATG AACCAGCGTA ATTTTATCGC ATCACAAAAA
CGTATTCACG ATGCGCTGAG TTTAACCGCG GAAGAACGAT ACCTGGAACT ATTAAAAAAT
CACCCGGATT TTTTACAACG GTTTCCGCAA ACCATGCTGG CATCTTATCT GGGCATTACG
GCTGAGACAT ACAGCAGGAT ACGGAAGAAG GCGCTAAAAT AG
 
Protein sequence
MHDALRAYIE KYASEKISDA DFEEVKKAFT FKRYKKGQFL LQEGEVSKYT AFVLKGSMRQ 
YSVDAKGTEH IIHFGIENWW VGDRESSTML TPSNYNIDAI EDTEVLLTTS EDLQQLTAAL
PVIGKMVNTM NQRNFIASQK RIHDALSLTA EERYLELLKN HPDFLQRFPQ TMLASYLGIT
AETYSRIRKK ALK