Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2747 |
Symbol | |
ID | 8726497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3321963 |
End bp | 3322526 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003387561 |
Protein GI | 284037631 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000105998 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAGAGT TTATCCGGTT TATTAAAGGA ATTATCTGGA TCGATGAGCT GGATTTACAA CTGGTGCTTT CCCGATGCCG GGAACGACAA GTCGGCAAAA GCAAACTACT GTTGAGAAAG GGGCAAATTG CCAGTCAGTA CTTTTTCATT GTATCCGGGG GCGTCCGCTT TTTCTACGAA GCCCACGATC AGGAAAATAC CACCTGGGTA ATGTTTGAAA ATGAGTTTTT CACTGAAATC TCAAGCCTCC ATCCCCAAAC GCCATCCCGG TTTAACATTG AAGCCATCGA CGAAACGAAG CTGATCGTGA TCGATAAGAA GGATATGGAT TTTTTATACG GACAGGTGGC AGCCTGGGAA GAGTTTGGGC GAAAAATTTG GGAGGCCACT ACCATCCGAA TGATCGATCA GCTTATGAAT TTTCAAACCT TATCGGCCGA AGAACGGTAC CTGAGTTTCC TGAAGAATTC TCAGCTAATC CAGAAAGCGC CCGTCAAGCA GGTAGCCGCT GTGCTGGGTA TTACCCCCAA TGCCTTAAGC CGAATCCGGA AAAAAATCCG CTAA
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Protein sequence | MEEFIRFIKG IIWIDELDLQ LVLSRCRERQ VGKSKLLLRK GQIASQYFFI VSGGVRFFYE AHDQENTTWV MFENEFFTEI SSLHPQTPSR FNIEAIDETK LIVIDKKDMD FLYGQVAAWE EFGRKIWEAT TIRMIDQLMN FQTLSAEERY LSFLKNSQLI QKAPVKQVAA VLGITPNALS RIRKKIR
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