Gene Slin_2747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2747 
Symbol 
ID8726497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3321963 
End bp3322526 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content46% 
IMG OID 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003387561 
Protein GI284037631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000105998 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGAGT TTATCCGGTT TATTAAAGGA ATTATCTGGA TCGATGAGCT GGATTTACAA 
CTGGTGCTTT CCCGATGCCG GGAACGACAA GTCGGCAAAA GCAAACTACT GTTGAGAAAG
GGGCAAATTG CCAGTCAGTA CTTTTTCATT GTATCCGGGG GCGTCCGCTT TTTCTACGAA
GCCCACGATC AGGAAAATAC CACCTGGGTA ATGTTTGAAA ATGAGTTTTT CACTGAAATC
TCAAGCCTCC ATCCCCAAAC GCCATCCCGG TTTAACATTG AAGCCATCGA CGAAACGAAG
CTGATCGTGA TCGATAAGAA GGATATGGAT TTTTTATACG GACAGGTGGC AGCCTGGGAA
GAGTTTGGGC GAAAAATTTG GGAGGCCACT ACCATCCGAA TGATCGATCA GCTTATGAAT
TTTCAAACCT TATCGGCCGA AGAACGGTAC CTGAGTTTCC TGAAGAATTC TCAGCTAATC
CAGAAAGCGC CCGTCAAGCA GGTAGCCGCT GTGCTGGGTA TTACCCCCAA TGCCTTAAGC
CGAATCCGGA AAAAAATCCG CTAA
 
Protein sequence
MEEFIRFIKG IIWIDELDLQ LVLSRCRERQ VGKSKLLLRK GQIASQYFFI VSGGVRFFYE 
AHDQENTTWV MFENEFFTEI SSLHPQTPSR FNIEAIDETK LIVIDKKDMD FLYGQVAAWE
EFGRKIWEAT TIRMIDQLMN FQTLSAEERY LSFLKNSQLI QKAPVKQVAA VLGITPNALS
RIRKKIR