Gene Slin_5714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5714 
Symbol 
ID8729489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6952493 
End bp6953077 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content53% 
IMG OID 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003390478 
Protein GI284040548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00341706 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCATGC CCAACGCTAT TTTTCACCAG TTTCTGCAAC GCTTTTGTCC GTTCACCGAG 
ACGGAATCCG ACGCGCTATT CGCCTTGTTC GAGCCATTGG TGGCAGGTCG GAAACACCAT
CTTCAGCAGG AAGGCGACCG GGTGGAACGG GTGTATTTTG TGCAATCGGG CGTGTTGCGC
GGCTACTACC TCAAAGAAGG CGAGGAGATA ACGTCCAACT TCTATTTCGG ACCGACGCTG
ACAGGCGATG TGGTGGCCCT GCGCGAGAAA ACGACTACCC GGCTGAATAT TCAGGTTATC
GAAGAGGGTA CGCTGTGGCA AGCTCGGCTC GCACAGATTG ACGAACTATC GGCACAATAC
CCCATCATGT ACCGCTTGTT CATGGTCTTT TTCGAGCGAC TGTACGCGTT CAACCACAAA
CGCCAGCTTT CCTTTATTTA CGACACGCCC ACCGAACGGT ACCTTAAACT ATTCGCCGAA
CGGCCCAAAG TAATGGCACA GATTCCGCAG CATTACATCG CTTCTTACCT AGGTATCAAG
CCCGAATCGC TCAGCCGTAT CCGCAAGCGC ATCATGCACG AGTGA
 
Protein sequence
MPMPNAIFHQ FLQRFCPFTE TESDALFALF EPLVAGRKHH LQQEGDRVER VYFVQSGVLR 
GYYLKEGEEI TSNFYFGPTL TGDVVALREK TTTRLNIQVI EEGTLWQARL AQIDELSAQY
PIMYRLFMVF FERLYAFNHK RQLSFIYDTP TERYLKLFAE RPKVMAQIPQ HYIASYLGIK
PESLSRIRKR IMHE