Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5714 |
Symbol | |
ID | 8729489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6952493 |
End bp | 6953077 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003390478 |
Protein GI | 284040548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00341706 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCATGC CCAACGCTAT TTTTCACCAG TTTCTGCAAC GCTTTTGTCC GTTCACCGAG ACGGAATCCG ACGCGCTATT CGCCTTGTTC GAGCCATTGG TGGCAGGTCG GAAACACCAT CTTCAGCAGG AAGGCGACCG GGTGGAACGG GTGTATTTTG TGCAATCGGG CGTGTTGCGC GGCTACTACC TCAAAGAAGG CGAGGAGATA ACGTCCAACT TCTATTTCGG ACCGACGCTG ACAGGCGATG TGGTGGCCCT GCGCGAGAAA ACGACTACCC GGCTGAATAT TCAGGTTATC GAAGAGGGTA CGCTGTGGCA AGCTCGGCTC GCACAGATTG ACGAACTATC GGCACAATAC CCCATCATGT ACCGCTTGTT CATGGTCTTT TTCGAGCGAC TGTACGCGTT CAACCACAAA CGCCAGCTTT CCTTTATTTA CGACACGCCC ACCGAACGGT ACCTTAAACT ATTCGCCGAA CGGCCCAAAG TAATGGCACA GATTCCGCAG CATTACATCG CTTCTTACCT AGGTATCAAG CCCGAATCGC TCAGCCGTAT CCGCAAGCGC ATCATGCACG AGTGA
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Protein sequence | MPMPNAIFHQ FLQRFCPFTE TESDALFALF EPLVAGRKHH LQQEGDRVER VYFVQSGVLR GYYLKEGEEI TSNFYFGPTL TGDVVALREK TTTRLNIQVI EEGTLWQARL AQIDELSAQY PIMYRLFMVF FERLYAFNHK RQLSFIYDTP TERYLKLFAE RPKVMAQIPQ HYIASYLGIK PESLSRIRKR IMHE
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