Gene Fjoh_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3107 
Symbol 
ID5093103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3675054 
End bp3675680 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content35% 
IMG OID644742535 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001195443 
Protein GI146300852 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCA AAGAAATTGA GATTCTTAAA AATAATGGGA TAGATACTCT CTATCAATTG 
ATCTTGAGAT ATGTAGCGAT TAGTGATGAT GAATGGAAGT ACTGCCAGAG TAAGTTCAGC
AGCAGTTATT TTCCTAAAAA GACAATGCTA TTAGATCAAA ATCAGGTCTG TGATAAAATT
TTCTTTATTG CCAGCGGATT GCTGCGTATT TATTTTTCTG ATGAGAGAGG AGAGGAGAAG
ACATTTCATT TTTGTATGGA GAATACCTTT GCTACTGATT ATGAGAGCTT TTTAAAGAAT
ATACCTTCAA ATTTTTCAAT ACAAGCCCTT GAGAATAGTG TAGTTATAAT AGTTACTCAT
GAAATGCTGC AAAGTTTATA CGTGACTCTG AGAGATGGTG AGAAGCTTGG AAGACTAATT
ACAGAGGATT ATTTTTTTAT GCTTAATGAA AAAATCAAGG CTTTTTATAT GCATTCGCCC
ATGGAACGCT ATAAAGCAAT GAATATTCAG TTTCCGGGCC TTATGCAGAG AGTGCCGCAG
TATTATATTG CTTCCTACCT CAATATTAGT CCTGTACATC TCAGCCGTTT GAAGTATACG
TTGAAAAAAA AGAACCCAAA CGGTTAA
 
Protein sequence
MKAKEIEILK NNGIDTLYQL ILRYVAISDD EWKYCQSKFS SSYFPKKTML LDQNQVCDKI 
FFIASGLLRI YFSDERGEEK TFHFCMENTF ATDYESFLKN IPSNFSIQAL ENSVVIIVTH
EMLQSLYVTL RDGEKLGRLI TEDYFFMLNE KIKAFYMHSP MERYKAMNIQ FPGLMQRVPQ
YYIASYLNIS PVHLSRLKYT LKKKNPNG