Gene CHU_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0397 
Symbol 
ID4184231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp466789 
End bp467346 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content41% 
IMG OID638070405 
Productcyclic nucleotide binding regulatory protein 
Protein accessionYP_677027 
Protein GI110636820 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.081454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT TTTTCAATGC ATTCGGATTA ATCAATGAAA AAGAATTAGA TCTTGTCGAT 
TCGCTTTCCA GGAAACGTTT ATTAAAAAAA GGTGAATACC TAACGGTAGA AGGCAACGTA
TCAAACGAAA TTGCGCTGAT TAAATCCGGC ATCCTCCGGT TGTTTTATAC AAATGCCAGC
GGCGAGGAAA TTACCGGATG CCTGGCCTTC GACAATGAGC TCTTATCCGC TTATTCCAGT
TTTATTACGC AGCAACCTTC TGAAGAAAAC ATCCAGGCTG TTTGCGACAC AGAAATCATT
ACGTTAACCA AAGAAAATCT GGATTTATTG TATAGCCGTG ATGCAGGCTG GCAAATGATC
GGCAGAATCC TTGCGGAAAT GCATTATGTA GAGCTAACAA AAAAGATCAT ATCCTTTCAA
AAAGATACCG CCAAAGAGCG CTACAACAAA CTCATCACGC AACAACCTCA ATACATTCAG
GCAATACCTC AATACCAGCT CGCTTCTTTT CTGGGCATTA CACCAAGACA TTTAAGCCGG
CTGCGGAAAG AATTCTGA
 
Protein sequence
MKQFFNAFGL INEKELDLVD SLSRKRLLKK GEYLTVEGNV SNEIALIKSG ILRLFYTNAS 
GEEITGCLAF DNELLSAYSS FITQQPSEEN IQAVCDTEII TLTKENLDLL YSRDAGWQMI
GRILAEMHYV ELTKKIISFQ KDTAKERYNK LITQQPQYIQ AIPQYQLASF LGITPRHLSR
LRKEF