Gene CHU_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1123 
Symbol 
ID4186498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1295758 
End bp1296315 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content37% 
IMG OID638071120 
Productcyclic nucleotide binding regulatory protein 
Protein accessionYP_677738 
Protein GI110637531 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.223037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT TTTTAAAATC GTTACAGATA CTTTCTGATA ACGAACTTCA AAAAATCAAT 
GCAGTAATCA AAACTAAATT CTTAAAAAAG AATGGATTTC TTATAAAGGA GGGTGCAGTA
TGTGATGAGA TTGCATGGAT TAAAACAGGT ATTTTACGAT CGTATTACAG CAATGTAGAA
GGTAAGGAAA CCACTAAATG CATTGCGTTT GAAAATGAGT TAACCGCTGC ATATTCAAGC
TTTATTACAC AAGAGCCAAC CTTTGAAAAT ATACATGCAT TGTGTGATTC AGAGCTGCTT
GTTTTGAAAC GCACGGACTT ATATGCCTTG TATGCAGGCA GTGCTGAATG GCAAAACGTT
GGCAGAATAT TGACGGAATT GCATTACATT GATCTGGAGA AACGGACTGT ATCCTTTCAA
AAACAAACAG GTAAAGAACG GTATGAAGCA CTTGCGGCAG AACATTCCAA ATACATTAAA
TTTATTCCGT TAAAACACCT TTCCTCTTTT TTAGGTATTA CTCCCCGGCA TTTAAGCCGG
CTGCGGAACG GATCGTAA
 
Protein sequence
MIEFLKSLQI LSDNELQKIN AVIKTKFLKK NGFLIKEGAV CDEIAWIKTG ILRSYYSNVE 
GKETTKCIAF ENELTAAYSS FITQEPTFEN IHALCDSELL VLKRTDLYAL YAGSAEWQNV
GRILTELHYI DLEKRTVSFQ KQTGKERYEA LAAEHSKYIK FIPLKHLSSF LGITPRHLSR
LRNGS