| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4002 |
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| Symbol | |
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| ID | 8360175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4981557 |
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| End bp | 4982120 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644966176 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_003123665 |
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| Protein GI | 256423012 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000843344 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0193683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATTC AACAAATACT GTGTAATATC TATCCGCTGC CGCCTCAATC TTTGGCGCAG
TTAGAAAGTA TTGCTGAACA AAAAAGTCAT CCCAAAGGAC ATTTGTTGTT AAGGGCCGGA
CGGATCGAGG ATCAGGTGTA TTTTATCAAA CAGGGGATTG CCCGTGCATT TTCAGAGAAG
CGTGACCGGA ACGTTACTTT CTGGTTCGGA CAGGAAGGGG ATGCCGTGGT GTCCATGAGA
AGTTATGTTG AACAGAAACC CGGCTATGAG CATATAGAGT TGCTGGAAGA CTGTAAATTG
TTTCAGATGG AGGCGGCGAA ACTCCAGGGC TTATACCGGC AGGATATCAA TATTGCCAAC
TGGGGAAGGA AATTTGCAGA AAAAGAGATC ATCAAAACAG AGAACAGACT GATCAAATTA
CAGATCGGTA GTGCCAGTGA ACGGTATAAG GAATTTATGG AGGAAAACCC GGCTTTACTT
CAGCGGGTGC CGCTTGGGCA TATCGCCTCT TATCTTGGTA TATCGGCAGT AAGTCTAAGC
CGTATCAGGG CCGGAAAAAG CTAA
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| Protein sequence | MTIQQILCNI YPLPPQSLAQ LESIAEQKSH PKGHLLLRAG RIEDQVYFIK QGIARAFSEK
RDRNVTFWFG QEGDAVVSMR SYVEQKPGYE HIELLEDCKL FQMEAAKLQG LYRQDINIAN
WGRKFAEKEI IKTENRLIKL QIGSASERYK EFMEENPALL QRVPLGHIAS YLGISAVSLS
RIRAGKS
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