| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6710 |
|---|
| Symbol | |
|---|
| ID | 8362901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8404582 |
|---|
| End bp | 8405151 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644968842 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003126312 |
|---|
| Protein GI | 256425659 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCT TACTACGATT TATTCATGCG ATGACAACCT TTTCAGCAGA AAGCTGGCTA
CGTTTGCAAC CGGCATTGTC AACGCAGGAA TTTATGAAGA ATGAATTTTT ACTAAAGGAA
GGAGCGGTTT GTACATCGCT CTTTTTTATT GAAAAAGGCT ACTGCCGCAG TTTTCATGAA
ATAGATGGTA TTGAAAAGAA TACTGCTTTT TACCTGGAGA ATGATATTGC TACCAATATC
AGAAGTTTTG GCAGCGGAGA AAAATCTGCT GCCAGTATTA TTGCCTGTGA ACCGGTAAAG
GCGATTGTTT TTGACAAAGC ATTACTATTT GAGGCTGCGA AGCATACGCC TGAAATAGAG
GCGTTGGGAA GGAACTGTAT ACGACTTTTT GCGGCGAAGC AGGACGAGTT TGCCACCTTG
TTTAATATTT ATGCTGCTAA AGACAGACTG GCTTATATAG AAGAAAAACA TCCACAGCTT
TTACAACGCG TTTCCCAGAC GCAACTGGCT TCTTTCCTTG GCGTAGCAAG AGAAACCCTG
AGCCGGATCC GGAAAAGAAG AGTTCCCTGA
|
|---|
| Protein sequence | MEPLLRFIHA MTTFSAESWL RLQPALSTQE FMKNEFLLKE GAVCTSLFFI EKGYCRSFHE
IDGIEKNTAF YLENDIATNI RSFGSGEKSA ASIIACEPVK AIVFDKALLF EAAKHTPEIE
ALGRNCIRLF AAKQDEFATL FNIYAAKDRL AYIEEKHPQL LQRVSQTQLA SFLGVARETL
SRIRKRRVP
|
|---|
| |