Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2727 |
Symbol | |
ID | 8726477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3296983 |
End bp | 3297576 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003387542 |
Protein GI | 284037612 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0503116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC CACAATACCC TATCTTACAC CAGCAACTAC ACGAATTTGC TCAACTCTCC AATGCTGACC TTAACCTGGG ACAGGAATTC TGGCAAAGCC GAACCGTCGA CAGACATGAT TTTTTCAATA ACCCTAATTC CCTCTGTCGG CATATTGGCT TTATCGTGAA AGGCATTTTC CGGGTCTATT ATGTCGATCC GAAAACCGAG TTGGAACATA ACCTGTATTT TGCTACCGAA AACAATTTCA TCACCTCCCT GAAAAGCCTG CTGACCCGAA CCACCTGCCC GTACATTATT GAAGCCCTCG AAGATGCTGA ACTGTTTGTG ATGCAGTACG ACCACCTTCA GCAACTGTAC GAGCGTTCGC ACGGTTGGGA ACGCTTCGGT CGGCTCCTGG CAGAACAGTA CTTTCTGATG AACCAGCTAC GCTCGGAAAG TTTATTGATG CAGACGGCCG AGGAGCGCTA CATTGATTTA ATCACCAGCC AGCCCGATCT GTTGAATCGG GTTTCGCTCG GGCATATCTC GTCTTACCTG GGTATAAAAG GACCTTCCCT GAGCCGGATT CGGGCGCAAC TCGCGCGTAA ATAA
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Protein sequence | MTSPQYPILH QQLHEFAQLS NADLNLGQEF WQSRTVDRHD FFNNPNSLCR HIGFIVKGIF RVYYVDPKTE LEHNLYFATE NNFITSLKSL LTRTTCPYII EALEDAELFV MQYDHLQQLY ERSHGWERFG RLLAEQYFLM NQLRSESLLM QTAEERYIDL ITSQPDLLNR VSLGHISSYL GIKGPSLSRI RAQLARK
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