Gene Slin_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2727 
Symbol 
ID8726477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3296983 
End bp3297576 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content49% 
IMG OID 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003387542 
Protein GI284037612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0503116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCC CACAATACCC TATCTTACAC CAGCAACTAC ACGAATTTGC TCAACTCTCC 
AATGCTGACC TTAACCTGGG ACAGGAATTC TGGCAAAGCC GAACCGTCGA CAGACATGAT
TTTTTCAATA ACCCTAATTC CCTCTGTCGG CATATTGGCT TTATCGTGAA AGGCATTTTC
CGGGTCTATT ATGTCGATCC GAAAACCGAG TTGGAACATA ACCTGTATTT TGCTACCGAA
AACAATTTCA TCACCTCCCT GAAAAGCCTG CTGACCCGAA CCACCTGCCC GTACATTATT
GAAGCCCTCG AAGATGCTGA ACTGTTTGTG ATGCAGTACG ACCACCTTCA GCAACTGTAC
GAGCGTTCGC ACGGTTGGGA ACGCTTCGGT CGGCTCCTGG CAGAACAGTA CTTTCTGATG
AACCAGCTAC GCTCGGAAAG TTTATTGATG CAGACGGCCG AGGAGCGCTA CATTGATTTA
ATCACCAGCC AGCCCGATCT GTTGAATCGG GTTTCGCTCG GGCATATCTC GTCTTACCTG
GGTATAAAAG GACCTTCCCT GAGCCGGATT CGGGCGCAAC TCGCGCGTAA ATAA
 
Protein sequence
MTSPQYPILH QQLHEFAQLS NADLNLGQEF WQSRTVDRHD FFNNPNSLCR HIGFIVKGIF 
RVYYVDPKTE LEHNLYFATE NNFITSLKSL LTRTTCPYII EALEDAELFV MQYDHLQQLY
ERSHGWERFG RLLAEQYFLM NQLRSESLLM QTAEERYIDL ITSQPDLLNR VSLGHISSYL
GIKGPSLSRI RAQLARK