Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1592 |
Symbol | |
ID | 8368037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1900295 |
End bp | 1900873 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644984031 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_003141698 |
Protein GI | 256820419 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.619308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATACG AATTACTTTT AAACAAGATA AGGGGATATA TAGCTCTATC GGGAAAGGAC TGTATTCTTA TAGAAGAGCT TTTTGAGCCT TTGTATCTTG CCAAAGGAGA GGTACTACTA CAAGAAGGTA AAGTTTGTAG GCATTTCTGT TATGTAAACA AGGGATTACT GAGGCAATTT ATGAATTATG ATGGGAAAGA ACTTACTATA CACTTTAACG AAGAGAATAC TTTTGTTTGC GACTATGAGA GTTTTATAAC TAAAACACCT TCACAGAAAA CAATCATTGC ACTTGAAGAT AGTGTTTTGC AAATGATTTC TTACGGTAAT TTGCAACGGT TTTACAAAGA AATAGAAGAG GGTGAACGGT TTGGTAGGCT ACTACTTGAA GAGACTTTTA TCAAAGCAGT ACAATACATC ATTTCGGGAC TTACTGATAG TCCGCAAGAA CGTTATTCGA AATTTATGAA GCAATATAAA AATATTGAGC AACGAGTAGC ACAGAAATAC ATAGCTTCGT TTGTAGGAGT TACTCCACAA TCATTGAGCA GAATTAGAAG AAGAATAGCC TATATGTAA
|
Protein sequence | MKYELLLNKI RGYIALSGKD CILIEELFEP LYLAKGEVLL QEGKVCRHFC YVNKGLLRQF MNYDGKELTI HFNEENTFVC DYESFITKTP SQKTIIALED SVLQMISYGN LQRFYKEIEE GERFGRLLLE ETFIKAVQYI ISGLTDSPQE RYSKFMKQYK NIEQRVAQKY IASFVGVTPQ SLSRIRRRIA YM
|
| |