Gene Coch_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1592 
Symbol 
ID8368037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1900295 
End bp1900873 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content34% 
IMG OID644984031 
Productcyclic nucleotide-binding protein 
Protein accessionYP_003141698 
Protein GI256820419 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.619308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACG AATTACTTTT AAACAAGATA AGGGGATATA TAGCTCTATC GGGAAAGGAC 
TGTATTCTTA TAGAAGAGCT TTTTGAGCCT TTGTATCTTG CCAAAGGAGA GGTACTACTA
CAAGAAGGTA AAGTTTGTAG GCATTTCTGT TATGTAAACA AGGGATTACT GAGGCAATTT
ATGAATTATG ATGGGAAAGA ACTTACTATA CACTTTAACG AAGAGAATAC TTTTGTTTGC
GACTATGAGA GTTTTATAAC TAAAACACCT TCACAGAAAA CAATCATTGC ACTTGAAGAT
AGTGTTTTGC AAATGATTTC TTACGGTAAT TTGCAACGGT TTTACAAAGA AATAGAAGAG
GGTGAACGGT TTGGTAGGCT ACTACTTGAA GAGACTTTTA TCAAAGCAGT ACAATACATC
ATTTCGGGAC TTACTGATAG TCCGCAAGAA CGTTATTCGA AATTTATGAA GCAATATAAA
AATATTGAGC AACGAGTAGC ACAGAAATAC ATAGCTTCGT TTGTAGGAGT TACTCCACAA
TCATTGAGCA GAATTAGAAG AAGAATAGCC TATATGTAA
 
Protein sequence
MKYELLLNKI RGYIALSGKD CILIEELFEP LYLAKGEVLL QEGKVCRHFC YVNKGLLRQF 
MNYDGKELTI HFNEENTFVC DYESFITKTP SQKTIIALED SVLQMISYGN LQRFYKEIEE
GERFGRLLLE ETFIKAVQYI ISGLTDSPQE RYSKFMKQYK NIEQRVAQKY IASFVGVTPQ
SLSRIRRRIA YM