| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6650 |
|---|
| Symbol | |
|---|
| ID | 8362839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8341560 |
|---|
| End bp | 8342150 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644968783 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003126255 |
|---|
| Protein GI | 256425602 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCAG ACACTGAAAT ATATTTACGT TCAATCAAAG CCATCTGCCC CGATTTACGG
GAGGAAGAAC TGTCACAGTT TGCCGCAAAA CTGACCCTGC AGGAATTGGA TAAGAAAGAC
ATTTTTATTC AATCAGGTAA AGTACAGCAA TCCTTAGGCT TCGTTACCAA AGGGCTTATC
CGTTCTTTTT TTGTGGATCT TAACGGGAAT GAGATCAATG TTGGTTTCTA TGCAGAGGGA
GACTATGCGA CGCATTACCC GGCTTTTATC AGCCGGCAAC CCAGCAGCTA TACCATTCAA
TGCCTGGAAC CGGCCACATT CCTCTGTCTT AAATTTGATG ACCTGCAATG GATATACCAG
CAATATCCGA AGTTTGAAAG GTATGGTCGC CTGGTGGCTG AAGAGATCTT AAAAAGACAG
CAGGCGCGTA TTGAAAGCTT TGTATTTCAG ACCGCTGAAG AACGTTATCT TGATTTCGCA
ACACATCATG CCCGCTTATT CAACAGGGTC TCGCTATCCC ATCTTTCCAG CTACCTGGGT
ATCGAGCGAC AGACACTTAC CCGTATTCGC CAGAAAATAG CCCATAAATA G
|
|---|
| Protein sequence | MQADTEIYLR SIKAICPDLR EEELSQFAAK LTLQELDKKD IFIQSGKVQQ SLGFVTKGLI
RSFFVDLNGN EINVGFYAEG DYATHYPAFI SRQPSSYTIQ CLEPATFLCL KFDDLQWIYQ
QYPKFERYGR LVAEEILKRQ QARIESFVFQ TAEERYLDFA THHARLFNRV SLSHLSSYLG
IERQTLTRIR QKIAHK
|
|---|
| |