Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0777 |
Symbol | |
ID | 8224346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 917285 |
End bp | 917881 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644928648 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003085202 |
Protein GI | 255034581 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.438607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.285853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGATT TACTATTCGA TTTTATATCA AAATACATTT CGCTGACAGA AGATGAAAAA AAGGCAGTCG TTTCGCTGGC TATATTTCGC TCAGTAAAAA AGGGAACAAT TCTGCTTAGA GAAGGGGAGA AGTCTAACGA TGGCTATTTT GTTCTGAAAG GCTGTATCCG AACCTACTAT ATCGTAGACG GTGAAGAAAA AACGACAGCA TTCTACACCG AAATGGAAGC CTTGACGCCG CATTGCGTTA TCAATAAAGC TCCTTCCGAA TATTTTATTT CTTGCGTGAA CGATTCGATT TTACTCGTTT CAAACCCGGA TATGGAAACA GAAATATTCA GCAAGTTTCC GAAGTTTGAA AGCCTTTGCA GGATATTGGC AGAAGAATTA TTAGCTAAAC AGCAGATCAA TTTTGACGAG TTTAAAACAT CTTCTCCCGA GCAGCGATAT CTGAATCTGT TGGAGAAAAG GCCGGACCTC GTTCAGCGCG TGCCGCAGCA CCAGTTGGCC AGTTACCTCG GGATGAAGCC GCAATCGCTA AGCAGGCTAC GGGCTAGGAT TTTGGAGAAA AGCAAAGTAT TGAGCGTCAT TTCTTAA
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Protein sequence | MHDLLFDFIS KYISLTEDEK KAVVSLAIFR SVKKGTILLR EGEKSNDGYF VLKGCIRTYY IVDGEEKTTA FYTEMEALTP HCVINKAPSE YFISCVNDSI LLVSNPDMET EIFSKFPKFE SLCRILAEEL LAKQQINFDE FKTSSPEQRY LNLLEKRPDL VQRVPQHQLA SYLGMKPQSL SRLRARILEK SKVLSVIS
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