Gene Dfer_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0777 
Symbol 
ID8224346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp917285 
End bp917881 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content42% 
IMG OID644928648 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003085202 
Protein GI255034581 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.438607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.285853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATT TACTATTCGA TTTTATATCA AAATACATTT CGCTGACAGA AGATGAAAAA 
AAGGCAGTCG TTTCGCTGGC TATATTTCGC TCAGTAAAAA AGGGAACAAT TCTGCTTAGA
GAAGGGGAGA AGTCTAACGA TGGCTATTTT GTTCTGAAAG GCTGTATCCG AACCTACTAT
ATCGTAGACG GTGAAGAAAA AACGACAGCA TTCTACACCG AAATGGAAGC CTTGACGCCG
CATTGCGTTA TCAATAAAGC TCCTTCCGAA TATTTTATTT CTTGCGTGAA CGATTCGATT
TTACTCGTTT CAAACCCGGA TATGGAAACA GAAATATTCA GCAAGTTTCC GAAGTTTGAA
AGCCTTTGCA GGATATTGGC AGAAGAATTA TTAGCTAAAC AGCAGATCAA TTTTGACGAG
TTTAAAACAT CTTCTCCCGA GCAGCGATAT CTGAATCTGT TGGAGAAAAG GCCGGACCTC
GTTCAGCGCG TGCCGCAGCA CCAGTTGGCC AGTTACCTCG GGATGAAGCC GCAATCGCTA
AGCAGGCTAC GGGCTAGGAT TTTGGAGAAA AGCAAAGTAT TGAGCGTCAT TTCTTAA
 
Protein sequence
MHDLLFDFIS KYISLTEDEK KAVVSLAIFR SVKKGTILLR EGEKSNDGYF VLKGCIRTYY 
IVDGEEKTTA FYTEMEALTP HCVINKAPSE YFISCVNDSI LLVSNPDMET EIFSKFPKFE
SLCRILAEEL LAKQQINFDE FKTSSPEQRY LNLLEKRPDL VQRVPQHQLA SYLGMKPQSL
SRLRARILEK SKVLSVIS