25 homologs were found in PanDaTox collection
for query gene Sala_0301 on replicon NC_008048
Organism: Sphingopyxis alaskensis RB2256



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008048  Sala_0301  TetR family transcriptional regulator  100 
 
 		 207 aa  417  1e-116  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.212759 
 
 
-
 
NC_009719  Plav_0361  TetR family transcriptional regulator  45.05 
 
 		 192 aa  171  7.999999999999999e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1125  TetR family transcriptional regulator  42.02 
 
 		 200 aa  148  5e-35  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.849198  normal  1 
 
 
-
 
NC_010338  Caul_2669  hypothetical protein  39.89 
 
 		 196 aa  134  7.000000000000001e-31  Caulobacter sp. K31  Bacteria  normal  0.395376  normal  1 
 
 
-
 
NC_010506  Swoo_2397  TetR family transcriptional regulator  29.53 
 
 		 194 aa  91.7  7e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  0.460379  normal  0.0825777 
 
 
-
 
NC_009943  Dole_2544  TetR family transcriptional regulator  32.84 
 
 		 206 aa  86.3  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0158307  n/a   
 
 
-
 
NC_008148  Rxyl_3190  TetR family transcriptional regulator  33.16 
 
 		 202 aa  51.2  0.00001  Rubrobacter xylanophilus DSM 9941  Bacteria  unclonable  0.0000000548437  n/a   
 
 
-
 
NC_002939  GSU2698  TetR family transcriptional regulator  29.81 
 
 		 203 aa  48.1  0.0001  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1709  transcriptional regulator, TetR family  33.75 
 
 		 203 aa  45.8  0.0004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.922562  normal  1 
 
 
-
 
NC_010814  Glov_3436  transcriptional regulator, TetR family  24.27 
 
 		 194 aa  45.4  0.0006  Geobacter lovleyi SZ  Bacteria  normal  0.262135  n/a   
 
 
-
 
NC_008609  Ppro_0332  TetR family transcriptional regulator  30.77 
 
 		 192 aa  45.1  0.0007  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00337125  n/a   
 
 
-
 
NC_011146  Gbem_2371  transcriptional regulator, TetR family  32.73 
 
 		 190 aa  44.7  0.001  Geobacter bemidjiensis Bem  Bacteria  normal  0.0185343  n/a   
 
 
-
 
NC_012918  GM21_1848  transcriptional regulator, TetR family  32.73 
 
 		 190 aa  44.7  0.001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00246548 
 
 
-
 
NC_013216  Dtox_3058  transcriptional regulator, TetR family  27.89 
 
 		 204 aa  44.3  0.001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00000151008  decreased coverage  0.0000000705144 
 
 
-
 
NC_007517  Gmet_0808  TetR family transcriptional regulator  31.09 
 
 		 191 aa  42.7  0.003  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.287096 
 
 
-
 
NC_014158  Tpau_1018  transcriptional regulator, TetR family  30.69 
 
 		 205 aa  42.7  0.004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5370  TetR family transcriptional regulator  34.15 
 
 		 187 aa  42.4  0.005  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010681  Bphyt_1885  transcriptional regulator, TetR family  27.55 
 
 		 204 aa  42.4  0.005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.393011  normal  0.0927704 
 
 
-
 
NC_007952  Bxe_B2650  TetR family transcriptional regulator  32.1 
 
 		 195 aa  42.4  0.005  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_3500  TetR family transcriptional regulator  28.85 
 
 		 191 aa  42  0.006  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00541119  n/a   
 
 
-
 
NC_007492  Pfl01_4306  TetR family transcriptional regulator  29.03 
 
 		 202 aa  42  0.006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.651969  normal  0.688785 
 
 
-
 
NC_009664  Krad_4255  transcriptional regulator, TetR family  38.36 
 
 		 223 aa  41.6  0.007  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.228182 
 
 
-
 
NC_013411  GYMC61_1759  transcriptional regulator, TetR family  27.35 
 
 		 217 aa  41.6  0.007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II0035  putative transcriptional regulator, TetR family  26.21 
 
 		 202 aa  41.6  0.009  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RS05498  putative transcription regulator protein  30.43 
 
 		 197 aa  41.6  0.009  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.806773 
 
 
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