Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0361 |
Symbol | |
ID | 5453462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 387238 |
End bp | 387816 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640875926 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001411641 |
Protein GI | 154250817 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGCATA CGCCCAAGGC GGAAGACGGG CGGAAGCTTC GCAGCGAGGA AAGCCGGCGC AAGATCGTTG AAGCGCTGTT CGAGATCACG CGCTCCGGAA CGATGGCACC GAGTGCGGCG CAGGTTGCTG AGAAGGCCGG CGTCGGCGTG CGCACGGTCT TTCGTCATTT CGAGGAGATG GACAGTCTTT ACAGCGAAAT GTCGGAGCAG GCCGCGGCGC GCATCCTGCC GGTCGTGAGG GCGCCCTACA CTGCCAGCAC CTGGCGCGGC CGGCTGGACG AGCTGCTCGA GCGGCGTTTC GGCATCTATG AGGAGATGCT GCCAATCAAG ATGGCCGGCG ACATCTACCG GTTCCGATCG TCCTTCCTGA TGCAGGACTA TCAGTACTAT CTGCAGGTGG AGCGCGAGAC GCTTTACGAG GTGTTGCCCG CGCGCGTCGC GAGAAACAAA AAACTCACGG AAACGCTGCT GCTGCTGGCG AGCTTCCAGA CATGGCGCCA GTTGCGGCAG GACCAGGATC TGAGCTCCGG GGAGGCCGCG GAAGCGATCC GGGCGGCCGT CGGCCAGCTT ACCGAATAG
|
Protein sequence | MVHTPKAEDG RKLRSEESRR KIVEALFEIT RSGTMAPSAA QVAEKAGVGV RTVFRHFEEM DSLYSEMSEQ AAARILPVVR APYTASTWRG RLDELLERRF GIYEEMLPIK MAGDIYRFRS SFLMQDYQYY LQVERETLYE VLPARVARNK KLTETLLLLA SFQTWRQLRQ DQDLSSGEAA EAIRAAVGQL TE
|
| |