| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4306 |
|---|
| Symbol | |
|---|
| ID | 3714122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4863367 |
|---|
| End bp | 4863975 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_350034 |
|---|
| Protein GI | 77460527 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.651969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.688785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTC CCCAGCGCCT CACCGACCGA AAACGCGAAG CCATCATCCA GGCCGCGATC
ACCGAATTTC GTACCAACGG TTTCGAGGTC ACCAGCATGG ACAAGATTGC GGCCACTGCC
GGGGTGTCGA AGCGTACGGT GTACAACCAT TTTCCGAGCA AGGAAGAGCT GTTCGCCGAA
ATTCTCAACC AGTTGTGGGC ACGGATCAGC ACCGAGCAAA CCGTCTCGTA TCAGCCCGAT
CAGCCATTGC GCGATCAATT GCGAACCATG CTGCTGGCCA AACTGCAGAT GATGGCGGAC
GACAATTTCA TGAATCTGGC CCGCGTTGCC ATCGCGGCGG CGATCCATTC GCCGGAGCGC
GCGCAGAACA TGGTGGCGCG CATGGGCGAA CGTGAGGAAA GCGTGACTGT GTGGATTCGC
GCCGCCCAGG CGGATGGTCG ATTGAAACCG GTCGATCCGG CGTTCGCCGC CCATCAAGTG
CAAGGGCTGC TGAAAACCTT TGCCTTCTGG CCACAAATCT CCCTGGGCCA ACCCTCGCTC
GACAGCACAG CGCAAAATGC CGTGGTCGAC TCTGCACTCG ACATGTTCCT GACCTGCTAT
CAGCTCTAG
|
|---|
| Protein sequence | MTAPQRLTDR KREAIIQAAI TEFRTNGFEV TSMDKIAATA GVSKRTVYNH FPSKEELFAE
ILNQLWARIS TEQTVSYQPD QPLRDQLRTM LLAKLQMMAD DNFMNLARVA IAAAIHSPER
AQNMVARMGE REESVTVWIR AAQADGRLKP VDPAFAAHQV QGLLKTFAFW PQISLGQPSL
DSTAQNAVVD SALDMFLTCY QL
|
|---|
| |