Gene Dole_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2544 
Symbol 
ID5695395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp3079075 
End bp3079695 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content62% 
IMG OID641265153 
ProductTetR family transcriptional regulator 
Protein accessionYP_001530425 
Protein GI158522555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0158307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCTG AATTGACCAT GTCAGGCACA CTCCCTTCCG CTGACGGCCG AAAAGACCGG 
TCCCGGCGCT CTAAAACCGC CATTGCCATG GCCCTGATGG AGCTGATCGC CGCCGGCCGC 
ACCGCACCCA CGGCAAAGCA GATCGCCGAA CAGGCAGGGG TCTCCCCCCG GCTGGTCTTC 
CACCACTTTC CGGACATGGC GTCCATATAT AATATGATGC TGGCCCTTCA GTTTGAGCGG 
TTGGCCCCCC TGCTGGAGAT CGACATTCCG CGGGAAGCGC CTTTTGACAA ACGGCTGGCC 
GGGTTTGTAG ACCACCGCAC CACCCTGCTG GAGTTTATCT CCCCCACCCG CCGGGCCGTT 
CTCTCAAGCG GGCTGTGGAA TGCCGTGACC GACGGCCTTG GTCTGTGCCG CCGGATCAAA 
GAGGAGCAGG CGGGACGGAT ATTCGGCCCT GAACTGGCAA ACCATGAGGC CGACGAATCG 
GCCCGGCGGC TGGCGGGCCT GAAAACAGCC GGTTCATGGC TCACATGGCA TACCCTGCGC 
GATATTCAGG GGCTTTCCGC TGATGCGGCC GGCCGTGTCA TGGCCCACAT GATCCGGTCG 
ATACTGCTGT TTGCGCCTTA A
 
Protein sequence
MPSELTMSGT LPSADGRKDR SRRSKTAIAM ALMELIAAGR TAPTAKQIAE QAGVSPRLVF 
HHFPDMASIY NMMLALQFER LAPLLEIDIP REAPFDKRLA GFVDHRTTLL EFISPTRRAV 
LSSGLWNAVT DGLGLCRRIK EEQAGRIFGP ELANHEADES ARRLAGLKTA GSWLTWHTLR 
DIQGLSADAA GRVMAHMIRS ILLFAP