| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1885 |
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| Symbol | |
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| ID | 6284306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2118395 |
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| End bp | 2119009 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621449 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001895517 |
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| Protein GI | 187923875 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.393011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0927704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAA GCACCACTCA CCAACGCCTG ACCGACCGCA AGCGCGTCGC CATCGTCGAC
GCCGCGATCG AGGAATTCCT CGCGGCCGGT TACGACGCGA CCAGCATGGA CCGTATCGCC
GCCCGCGCGA ACGTCTCGAA ACGTACGGTC TACAACCATT TCCCAAGCAA GGAAGCGCTG
TTCGCGGCGA TCCTCCATCA GTTGTGGGAC GCGAGCCAGA GTAGCGACGC GCCCGCGTAC
AGCGCCGAGC AGCCATTGCG CGCGCAGTTG CTCGACCTGT TGGGCCGCAA GCTGCGACTG
CTGAACGACG AGTCTTTCCT GGCGCTGGCA CGCGTGGCGA TCGCGGCGGG CATCCATTCG
GCGGAGCGAG CGCGAGACAT GGTCGCCCGA CTCGGCGAAC GCGAGGAAGA CCTGACCGTG
TGGATCCGGG CGGCCGCCGC CGACGGCCGT CTCAAGACCG ACGATCCGCT GTTCGCGGCG
CTGCAGCTGC AGGCGCTGGT GAAGGCCTTC GCCTTCTGGC CGCAGGTGAC GATGGGCCAG
GCGCCGCTTA GCGAACGCGA GCAAAAGCAG GTCGCTGAAT CGGCCGCTGA CATGTTCCTC
GCACGCTATG CATGA
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| Protein sequence | MDPSTTHQRL TDRKRVAIVD AAIEEFLAAG YDATSMDRIA ARANVSKRTV YNHFPSKEAL
FAAILHQLWD ASQSSDAPAY SAEQPLRAQL LDLLGRKLRL LNDESFLALA RVAIAAGIHS
AERARDMVAR LGEREEDLTV WIRAAAADGR LKTDDPLFAA LQLQALVKAF AFWPQVTMGQ
APLSEREQKQ VAESAADMFL ARYA
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