Gene Tpau_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1018 
Symbol 
ID9155158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1046263 
End bp1046880 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003645990 
Protein GI296138747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTACC GGCAGACCGA ACGCGTGGCC TCGCGACTGG CCCAGCGTCG GGCCGATATC 
GTCGATGCGG CCTGCCTCCT GGTGAGCGAG GGCGGATTCG GCCACGCCAA GGTAGGGGCC 
ATCGCGCAGG CCGCCGGAGT CGGCGTGGGT TCGGTCTACA GCCACTTCGA CGGGATCGAC 
GGTCTGCACG CCGAAGTCTT CGCCCACTTC GCCGAGCGCG AATTGCAGCG CACCGCCGCC 
GATCTCGGTG CCCCCACCAA CCCCCGCGAG GCATTGATCC ACCTGGTCCG CGGGTTCGGC 
ACTCGCGCTC TGCGAGCCCC GGTGCTCGCG TGGGCGCTGC TGCTCGAACC GGCGGGCACC 
GTCATCGAAG AACTGCGCCG CAGCTACCGC GACGGCCACG CCGCACTCGC CGCCGAGCGG 
ATCGCCGCGG GCGTCGAATC CGGCGATTTC CCGGCGCAGG ACGCCCGCGT CACGGGTGCG 
GCGATCGTCG GCGCCATCGC CGAGACGCTC GTGCGGCCGC TGTCGCCCGG TTCCGCGGAC 
CCGGACGCCG CACCCGACAA CACCATCGAT GAGGCGATCG CCTTCTGCCT CCGCGCCGTC 
GGCGCGACAT CCGTGTGA
 
Protein sequence
MAYRQTERVA SRLAQRRADI VDAACLLVSE GGFGHAKVGA IAQAAGVGVG SVYSHFDGID 
GLHAEVFAHF AERELQRTAA DLGAPTNPRE ALIHLVRGFG TRALRAPVLA WALLLEPAGT 
VIEELRRSYR DGHAALAAER IAAGVESGDF PAQDARVTGA AIVGAIAETL VRPLSPGSAD 
PDAAPDNTID EAIAFCLRAV GATSV