Gene VSAL_II0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_II0035 
Symbol 
ID6961527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011313 
Strand+ 
Start bp45894 
End bp46502 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content34% 
IMG OID643381365 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_002264410 
Protein GI209808872 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAAA AATTGACATT ATCGCAGCAA AAACATCTTG ATATCATTCA TGCGGCTAAA 
AACGAATTTA TTGAATATGG TTTTTTAGCG GCAAATATGG ACAGAATCAC ATCATCTGCC 
GAAGTATCTA AACGTACGAT TTACCGTCAT TTTGAAAGTA AAGAAATGTT GTTTGAATCG 
GTATTGACCG TTATTAATGA TTCTGTAAGT AAGAGTGTCT CTTATCAATT TGATAAAAAT 
AAAAGCACAG AAGCACAACT GACTGAAATC GCTTATAAAG AAATTGATGT CCTTTATAAT 
ACATATGGAA TACCACTAGC ACGAACCATT GTGATGGAAT TTCTGCGTCA GCCTGATATG 
GCAAATCATG TAATTAAAAA TATTTATAGT ATTCGAGCGA TTACACACTG GTTTAGTGAA 
GCGATTACAG CAGGAAGGTT AAAAAACGCA GATCCACGAT TGATGACTGA TATATATGTG 
AGTTTATTCC AAGGTTTATT TCTTTGGCCT CAAGTAATGA ATTTAGCGAG CGAACTAACG 
GATGAAGACA TGAAGAGTAA AGTCGATACA GTAACGTCTG TTTTTATTCA GTCGTATGGA 
TTAACGTAA
 
Protein sequence
MQKKLTLSQQ KHLDIIHAAK NEFIEYGFLA ANMDRITSSA EVSKRTIYRH FESKEMLFES 
VLTVINDSVS KSVSYQFDKN KSTEAQLTEI AYKEIDVLYN TYGIPLARTI VMEFLRQPDM 
ANHVIKNIYS IRAITHWFSE AITAGRLKNA DPRLMTDIYV SLFQGLFLWP QVMNLASELT 
DEDMKSKVDT VTSVFIQSYG LT