Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_1848 |
Symbol | |
ID | 8137179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2148880 |
End bp | 2149452 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644869459 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003021659 |
Protein GI | 253700470 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.00246548 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAAGC TGGACAAGCG CGACCTGATA GTCCGGGCAG CTCTGGAACT GGTTGCGGAG CAGGGGTTCC ACGGCGCGCC TATGGCGATG ATCGCAGACA AGGCGGGGGT CGGGGCAGGG ACCATCTACC GTTACTTCGA GAACAAGGAT GCGCTGATCA GGGATATCTA CCGCATTGTA GAAGCGCGGG TGGTGGCGGC GATCCTGAAG GACTACCCCG ACAACGGACC GGTACGCGAG CGTTTCATGC ACTTTGGCAC CGTGCTGGTC AACTATCTGG TCTCGGCTCC GCTGGAGCTG CGTTTCGTCG AGCAGTTCCA CAACTCCCCG TTCGGCGTGG ATCATCGCCG AGAGAAGATC TTCGGCAAGG GGGAGAAGGA CATCATCAGC GAGCTGTTCC AGGAGGCGAT CGAGCAGCAG ATCTTTAAAC CCCTTCCGCT GTCGATCCTT TTCGCCCTGT TTTTCTCGCC ACTCATCGAT GTCTGTCGCG ACCAGATCCT GGGGTTCATC AACCTTGACC AGGGGCTGAT TGAGCAGACC GTCGGCGCCT GCTGGGACGC GGTTCGCAGG TAA
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Protein sequence | MEKLDKRDLI VRAALELVAE QGFHGAPMAM IADKAGVGAG TIYRYFENKD ALIRDIYRIV EARVVAAILK DYPDNGPVRE RFMHFGTVLV NYLVSAPLEL RFVEQFHNSP FGVDHRREKI FGKGEKDIIS ELFQEAIEQQ IFKPLPLSIL FALFFSPLID VCRDQILGFI NLDQGLIEQT VGACWDAVRR
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