More than 300 homologs were found in PanDaTox collection
for query gene Pmen_1375 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_4774  acyl-CoA dehydrogenase  86.3 
 
 
387 aa  682    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1375  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
387 aa  794    Pseudomonas mendocina ymp  Bacteria  normal  0.178062  normal  0.0980928 
 
 
-
 
NC_008463  PA14_54630  acyl-CoA dehydrogenase  85.79 
 
 
387 aa  679    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00169112 
 
 
-
 
NC_009901  Spea_2781  acyl-CoA dehydrogenase domain-containing protein  66.23 
 
 
385 aa  541  1e-153  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1475  butyryl-CoA dehydrogenase  66.49 
 
 
385 aa  540  9.999999999999999e-153  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00937307 
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  66.49 
 
 
385 aa  540  9.999999999999999e-153  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1340  butyryl-CoA dehydrogenase  67.37 
 
 
385 aa  537  1e-151  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.92296  n/a   
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  65.17 
 
 
385 aa  532  1e-150  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3200  acyl-CoA dehydrogenase domain-containing protein  65.96 
 
 
385 aa  533  1e-150  Shewanella woodyi ATCC 51908  Bacteria  normal  0.393512  hitchhiker  0.00650034 
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  66.58 
 
 
385 aa  531  1e-150  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_009092  Shew_1669  butyryl-CoA dehydrogenase  65.7 
 
 
385 aa  533  1e-150  Shewanella loihica PV-4  Bacteria  normal  0.260436  hitchhiker  0.00156032 
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  64.91 
 
 
385 aa  529  1e-149  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  64.91 
 
 
385 aa  530  1e-149  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05484  acyl-CoA dehydrogenase  65.17 
 
 
384 aa  529  1e-149  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000373  branched-chain acyl-CoA dehydrogenase  64.74 
 
 
384 aa  528  1e-149  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2595  acyl-CoA dehydrogenase domain-containing protein  64.12 
 
 
385 aa  528  1e-149  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000133331 
 
 
-
 
NC_008322  Shewmr7_2662  acyl-CoA dehydrogenase domain-containing protein  64.12 
 
 
385 aa  530  1e-149  Shewanella sp. MR-7  Bacteria  normal  0.553599  normal 
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  64.91 
 
 
385 aa  529  1e-149  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_008577  Shewana3_2769  acyl-CoA dehydrogenase domain-containing protein  64.38 
 
 
385 aa  529  1e-149  Shewanella sp. ANA-3  Bacteria  normal  normal  0.329604 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  64.91 
 
 
385 aa  530  1e-149  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1679  acyl-CoA dehydrogenase family protein  64.12 
 
 
385 aa  527  1e-148  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001547  branched-chain acyl-CoA dehydrogenase  63.97 
 
 
384 aa  526  1e-148  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2132  butyryl-CoA dehydrogenase  66.75 
 
 
388 aa  524  1e-147  Marinobacter aquaeolei VT8  Bacteria  normal  0.627987  n/a   
 
 
-
 
NC_008700  Sama_1377  butyryl-CoA dehydrogenase  64.12 
 
 
385 aa  521  1e-147  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0267981 
 
 
-
 
NC_011992  Dtpsy_1811  acyl-CoA dehydrogenase domain protein  66.23 
 
 
388 aa  520  1e-146  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3693  acyl-CoA dehydrogenase domain-containing protein  65.79 
 
 
388 aa  520  1e-146  Delftia acidovorans SPH-1  Bacteria  normal  0.625354  normal  0.0697869 
 
 
-
 
NC_008782  Ajs_2007  acyl-CoA dehydrogenase domain-containing protein  66.49 
 
 
388 aa  521  1e-146  Acidovorax sp. JS42  Bacteria  normal  0.510402  normal  0.124271 
 
 
-
 
NC_011138  MADE_01905  Acyl-CoA dehydrogenase family protein  63.66 
 
 
397 aa  516  1.0000000000000001e-145  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.271746  n/a   
 
 
-
 
NC_008752  Aave_2602  acyl-CoA dehydrogenase domain-containing protein  65.18 
 
 
388 aa  511  1e-143  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.000586554  normal  0.488782 
 
 
-
 
NC_012791  Vapar_3255  acyl-CoA dehydrogenase domain protein  66.14 
 
 
384 aa  508  1e-143  Variovorax paradoxus S110  Bacteria  normal  0.616941  n/a   
 
 
-
 
NC_003910  CPS_0658  acyl-CoA dehydrogenase  61.26 
 
 
388 aa  505  9.999999999999999e-143  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1516  butyryl-CoA dehydrogenase  61.64 
 
 
386 aa  498  1e-140  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0901  putative acyl-CoA dehydrogenase  61.64 
 
 
386 aa  496  1e-139  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_0300  acyl-CoA dehydrogenase domain-containing protein  59.9 
 
 
388 aa  494  9.999999999999999e-139  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3055  acyl-CoA dehydrogenase domain-containing protein  62.53 
 
 
379 aa  493  9.999999999999999e-139  Caulobacter sp. K31  Bacteria  normal  0.350853  normal 
 
 
-
 
NC_010717  PXO_01704  acyl-CoA dehydrogenase family member 8  61.07 
 
 
393 aa  481  1e-135  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.791292  n/a   
 
 
-
 
NC_009719  Plav_2898  acyl-CoA dehydrogenase domain-containing protein  59.52 
 
 
379 aa  478  1e-134  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000249127 
 
 
-
 
NC_011071  Smal_0220  acyl-CoA dehydrogenase domain protein  61.9 
 
 
388 aa  465  9.999999999999999e-131  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.581384  normal 
 
 
-
 
NC_009485  BBta_3579  acyl-CoA dehydrogenase  57.94 
 
 
381 aa  462  1e-129  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.740274 
 
 
-
 
NC_011894  Mnod_2176  acyl-CoA dehydrogenase domain protein  58.78 
 
 
380 aa  459  9.999999999999999e-129  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.110006  n/a   
 
 
-
 
NC_008347  Mmar10_1546  acyl-CoA dehydrogenase domain-containing protein  57.14 
 
 
378 aa  460  9.999999999999999e-129  Maricaulis maris MCS10  Bacteria  normal  0.295515  normal 
 
 
-
 
NC_011004  Rpal_3937  acyl-CoA dehydrogenase domain protein  57.98 
 
 
385 aa  456  1e-127  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.818683  n/a   
 
 
-
 
NC_009667  Oant_1871  acyl-CoA dehydrogenase domain-containing protein  58.67 
 
 
385 aa  456  1e-127  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2120  Acyl-CoA dehydrogenase-like  57.82 
 
 
382 aa  456  1e-127  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.270517  normal  0.533217 
 
 
-
 
NC_007925  RPC_3093  acyl-CoA dehydrogenase-like  57.45 
 
 
382 aa  455  1e-127  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_007958  RPD_3301  acyl-CoA dehydrogenase-like  57.67 
 
 
381 aa  456  1e-127  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.168826 
 
 
-
 
NC_008786  Veis_3538  butyryl-CoA dehydrogenase  63.4 
 
 
386 aa  454  1.0000000000000001e-126  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.689512  normal  0.938482 
 
 
-
 
NC_007643  Rru_A1835  butyryl-CoA dehydrogenase  59.15 
 
 
379 aa  452  1.0000000000000001e-126  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.571593  n/a   
 
 
-
 
NC_010511  M446_2476  acyl-CoA dehydrogenase domain-containing protein  58.51 
 
 
380 aa  454  1.0000000000000001e-126  Methylobacterium sp. 4-46  Bacteria  normal  0.893721  normal  0.185436 
 
 
-
 
NC_009505  BOV_1275  acyl-CoA dehydrogenase  58.13 
 
 
385 aa  454  1.0000000000000001e-126  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2190  acyl-CoA dehydrogenase domain-containing protein  56.61 
 
 
380 aa  449  1e-125  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.565732 
 
 
-
 
NC_009484  Acry_0623  acyl-CoA dehydrogenase domain-containing protein  59.47 
 
 
391 aa  449  1e-125  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2558  acyl-CoA dehydrogenase-like  57.14 
 
 
381 aa  447  1.0000000000000001e-124  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0589  acyl-CoA dehydrogenase-like  56.46 
 
 
380 aa  447  1.0000000000000001e-124  Chelativorans sp. BNC1  Bacteria  normal  0.371996  n/a   
 
 
-
 
NC_009511  Swit_0650  acyl-CoA dehydrogenase domain-containing protein  55.44 
 
 
381 aa  440  9.999999999999999e-123  Sphingomonas wittichii RW1  Bacteria  normal  0.187966  normal 
 
 
-
 
NC_009620  Smed_4241  acyl-CoA dehydrogenase domain-containing protein  55.85 
 
 
382 aa  433  1e-120  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0617  acyl-CoA dehydrogenase domain-containing protein  54.93 
 
 
380 aa  432  1e-120  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.432927  normal 
 
 
-
 
NC_010505  Mrad2831_3784  acyl-CoA dehydrogenase domain-containing protein  55.59 
 
 
381 aa  429  1e-119  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0514629  normal  0.596674 
 
 
-
 
NC_007794  Saro_0858  butyryl-CoA dehydrogenase  52.93 
 
 
380 aa  429  1e-119  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661231  n/a   
 
 
-
 
NC_008048  Sala_3053  Acyl-CoA dehydrogenase  53.05 
 
 
381 aa  428  1e-119  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.75901 
 
 
-
 
NC_007406  Nwi_2158  acyl-CoA dehydrogenase  56.88 
 
 
381 aa  425  1e-118  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.337808 
 
 
-
 
NC_009338  Mflv_5011  acyl-CoA dehydrogenase domain-containing protein  54.96 
 
 
387 aa  419  1e-116  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.117513  normal  0.214057 
 
 
-
 
NC_008146  Mmcs_1063  acyl-CoA dehydrogenase-like protein  53.35 
 
 
388 aa  415  9.999999999999999e-116  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1079  acyl-CoA dehydrogenase domain-containing protein  53.35 
 
 
388 aa  415  9.999999999999999e-116  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0773066 
 
 
-
 
NC_008726  Mvan_1361  acyl-CoA dehydrogenase domain-containing protein  54.42 
 
 
387 aa  416  9.999999999999999e-116  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.237176  normal 
 
 
-
 
NC_009077  Mjls_1090  acyl-CoA dehydrogenase domain-containing protein  53.08 
 
 
388 aa  413  1e-114  Mycobacterium sp. JLS  Bacteria  normal  0.992341  normal 
 
 
-
 
NC_008044  TM1040_1103  acyl-CoA dehydrogenase-like  53.3 
 
 
381 aa  414  1e-114  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp0931  hypothetical protein  50.92 
 
 
384 aa  407  1.0000000000000001e-112  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0900  hypothetical protein  50.66 
 
 
384 aa  407  1.0000000000000001e-112  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_012803  Mlut_02820  acyl-CoA dehydrogenase  52.8 
 
 
377 aa  406  1.0000000000000001e-112  Micrococcus luteus NCTC 2665  Bacteria  normal  0.986779  n/a   
 
 
-
 
NC_009428  Rsph17025_1335  acyl-CoA dehydrogenase domain-containing protein  53.19 
 
 
379 aa  399  9.999999999999999e-111  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.254429  normal  0.854455 
 
 
-
 
NC_009049  Rsph17029_1789  acyl-CoA dehydrogenase domain-containing protein  53.99 
 
 
379 aa  398  1e-109  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0858072  normal 
 
 
-
 
NC_011370  Rleg2_6081  acyl-CoA dehydrogenase domain protein  50.92 
 
 
381 aa  397  1e-109  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.517442  normal 
 
 
-
 
NC_009952  Dshi_1750  acyl-CoA dehydrogenase  53.53 
 
 
381 aa  395  1e-109  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.317107 
 
 
-
 
NC_007493  RSP_0156  Acyl-CoA dehydrogenase  53.46 
 
 
379 aa  394  1e-108  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3069  acyl-CoA dehydrogenase domain protein  51.47 
 
 
387 aa  389  1e-107  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.117634  n/a   
 
 
-
 
NC_013441  Gbro_3901  acyl-CoA dehydrogenase domain protein  53.35 
 
 
392 aa  388  1e-107  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4480  acyl-CoA dehydrogenase domain-containing protein  54.35 
 
 
381 aa  390  1e-107  Paracoccus denitrificans PD1222  Bacteria  normal  0.155011  normal 
 
 
-
 
NC_007802  Jann_1909  butyryl-CoA dehydrogenase  52.76 
 
 
381 aa  385  1e-106  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10766  acyl-CoA dehydrogenase fadE9  52.77 
 
 
390 aa  386  1e-106  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000000022778  normal 
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  47.75 
 
 
377 aa  336  5e-91  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2216  acyl-CoA dehydrogenase domain-containing protein  45.45 
 
 
375 aa  327  2.0000000000000001e-88  Pseudomonas putida KT2440  Bacteria  normal  0.585123  normal 
 
 
-
 
NC_013131  Caci_4530  acyl-CoA dehydrogenase domain protein  44.33 
 
 
389 aa  327  2.0000000000000001e-88  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335652  normal  0.412983 
 
 
-
 
NC_010501  PputW619_3455  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
375 aa  326  4.0000000000000003e-88  Pseudomonas putida W619  Bacteria  normal  normal  0.129524 
 
 
-
 
NC_009512  Pput_3522  acyl-CoA dehydrogenase domain-containing protein  45.45 
 
 
375 aa  326  4.0000000000000003e-88  Pseudomonas putida F1  Bacteria  normal  normal  0.0559083 
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  42.19 
 
 
380 aa  323  4e-87  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2684  putative acyl-CoA dehydrogenase  46.28 
 
 
375 aa  322  5e-87  Pseudomonas aeruginosa PA7  Bacteria  normal  0.126402  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  43.01 
 
 
380 aa  322  9.000000000000001e-87  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_31540  putative acyl-CoA dehydrogenase  45.74 
 
 
375 aa  319  3.9999999999999996e-86  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.430124  hitchhiker  0.000095284 
 
 
-
 
NC_007492  Pfl01_2867  Acyl-CoA dehydrogenase-like  44.5 
 
 
375 aa  318  7e-86  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.967944  normal  0.115681 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  42.67 
 
 
380 aa  317  2e-85  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1842  acyl-CoA dehydrogenase domain-containing protein  44.92 
 
 
375 aa  315  7e-85  Pseudomonas putida GB-1  Bacteria  normal  0.0292697  normal  0.208883 
 
 
-
 
NC_007333  Tfu_1647  acyl-CoA dehydrogenase  43.34 
 
 
385 aa  315  8e-85  Thermobifida fusca YX  Bacteria  normal  0.658516  n/a   
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  44.65 
 
 
376 aa  315  9.999999999999999e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_007298  Daro_0096  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  44.47 
 
 
378 aa  315  9.999999999999999e-85  Dechloromonas aromatica RCB  Bacteria  normal  0.0160842  normal 
 
 
-
 
NC_007951  Bxe_A4257  putative acyl-CoA dehydrogenase  43.85 
 
 
376 aa  312  5.999999999999999e-84  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.217203 
 
 
-
 
NC_009943  Dole_2500  acyl-CoA dehydrogenase domain-containing protein  43.8 
 
 
380 aa  311  7.999999999999999e-84  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3174  acyl-CoA dehydrogenase domain-containing protein  43.27 
 
 
383 aa  311  1e-83  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000929019  hitchhiker  0.000000000938929 
 
 
-
 
NC_009439  Pmen_2037  acyl-CoA dehydrogenase domain-containing protein  45.09 
 
 
375 aa  310  2e-83  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.666233 
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  41.16 
 
 
379 aa  310  2.9999999999999997e-83  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
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