| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3200 |
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| Symbol | |
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| ID | 6117519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3927562 |
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| End bp | 3928719 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641634744 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001761565 |
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| Protein GI | 170727539 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.393512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00650034 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATTTTA ATCTGAATGA CGACCAACGT CAGTTTGCCG ATTTAGCTCA GCAGTTTTCA
AGTGAAGAGT TAGCCCCGTT TGCGGCTAAA TGGGACGAAG AACATCATTT TCCTAAAGAT
GTGATCCAGC GTGCCGGTGA ACTTGGTTTC TGCTCACTTT ACTCTCCAGA AAGTGAAGGT
GGAATGGGCC TAAGTCGTCT CGATTCATCC ATTATTTTTG AGCAGCTCTC CATGGGCTGT
ACAGCCACCA CTGCCATGTT AACCATTCAC AACATGGCGA CCTGGATGCT CACCAGTTTT
GGCTCTGAAA CCTTAAGAGC TCAATGGTCT GAATCTTTGA CGACTGGCGA AAAGCTTGCT
TCTTACTGTT TAACAGAAGC GGGCGCTGGC AGTGATGCCG CTTCGCTAAA AACTAAAGCC
GTAAGGGAGG GGGATGAGTA TGTCATCTCT GGCGCCAAGA TGTTTATCTC TGGAGCAGGC
GCTACTGAGC TACTCGTGGT GATGTGCCGC ACAGGCGAAG CGGGACCGAA AGGGATCTCC
GCTATTGCCG TGCCAGCCGA TGCCGATGGC ATCACCTATG GTAAAGCGGA AGATAAGATG
GGCTGGAATG CACAGCCAAC ACGTGAAATC ACCTTTACTG AGGTGCGTGT GCCAGTCGCT
AATCTGCTGG GGGAAGAGGG TCAAGGGTTT ACGTTTGCGA TGAAGGGGCT CGATGGCGGT
CGCATCAATA TTGCTACTTG TTCAATCGGT ACGGCTCAAG CAGCTCTCGA ACGTGCAACT
CAATATATGA CTGAACGTAA ACAGTTTGGT AAGCCTATTG CGGCTTTTCA GGCGCTGCAG
TTTAAGCTAG CGGATATGGC GACTGAGCTT GTGGCGGCAA GACAGTTGGT GCGTTTAGCT
GCATTTAAAC TCGATCAGCA AGATCCTGAG GCCACAGCCT ACTGCGCCAT GGCGAAACGA
TTCGCGACCG ATATCGGTTT TCAGGTCTGT GATGCGGCCC TGCAGCTTCA TGGCGGCTAT
GGTTATATTC GTGAGTATCC TCTTGAGCGC CACGTACGTG ATGTGCGCGT GCACCAGATT
TTAGAGGGAA CCAATGAGAT CATGCGTCTT ATTATCGCCC GCCGTTTATT GAATGAAGAG
GCTGGTGCAA TCCTTTAG
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| Protein sequence | MDFNLNDDQR QFADLAQQFS SEELAPFAAK WDEEHHFPKD VIQRAGELGF CSLYSPESEG
GMGLSRLDSS IIFEQLSMGC TATTAMLTIH NMATWMLTSF GSETLRAQWS ESLTTGEKLA
SYCLTEAGAG SDAASLKTKA VREGDEYVIS GAKMFISGAG ATELLVVMCR TGEAGPKGIS
AIAVPADADG ITYGKAEDKM GWNAQPTREI TFTEVRVPVA NLLGEEGQGF TFAMKGLDGG
RINIATCSIG TAQAALERAT QYMTERKQFG KPIAAFQALQ FKLADMATEL VAARQLVRLA
AFKLDQQDPE ATAYCAMAKR FATDIGFQVC DAALQLHGGY GYIREYPLER HVRDVRVHQI
LEGTNEIMRL IIARRLLNEE AGAIL
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