| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2602 |
|---|
| Symbol | |
|---|
| ID | 4669096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2849243 |
|---|
| End bp | 2850409 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639823805 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_970948 |
|---|
| Protein GI | 120611270 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000586554 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.488782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCG AACTGACCGA AGAACAACGC GCCTTCGCCG ACACCGCCCG CGAGTTCGCC
CGGGCCGAAC TGGCACCCCA TGCAGCGCAA TGGGACGCGG AAGGCATCTT CCCGCGCGAG
GCGATCGCGA AAGCCGGCGC CCTGGGCTTC TGCGGCCTCT ACGCGCCCGA GAACGCCGGC
GGCCTCGCCC TGCCCCGGCT GGACGCCACG CTGGTGTTCG AGGAAATGGC GGCCATCGAT
CCCTCGACCA CCGCCTTCAT CACCATCCAC AACATGGCGA CCTGGATGCT GGGTACCTGG
GCCACCGATG CGGTGCGGAA CCATTGGGGC CCACTGCTCA CGAGTGGGCA GAAGCTCGCC
AGCTACTGCC TGACCGAGCC GGGCGCGGGC TCGGATGCGG CCTCGCTCAA GACGCGCGCC
GAGCTCGTCG GAAACGAATA CGTCATCAAC GGCGCCAAGG CCTTCATCAG CGGCGCCGGC
AGCACCGATG TGCTGGTGCT CATGGCCCGC ACGGGGTCGC CCGATTCCGG CGCGGGAGGC
ATCAGCGCCT TCGCCGTGCC GGCGGATGCG GCAGGCATCC AGTACGGCAA GAAGGAAGAG
AAGATGGGCT GGAACAGCCA GCCCACGCGC ACCATCAGTT TCGACAGCGT GCGCATCCCG
GCCGACCATC TGCTGGGGGC CGGGGGCGAA GGCTTCAAGA TCGCGATGAA GGGCCTGGAC
GGGGGCCGCA TCAACATTGC CACCTGCTCG GTGGGCGCGG CCCAGGGGGC GCTGAACGCC
GCACAGCAAT ACATGCAGGA CCGCAAGCAG TTCGGCAAGG CCATCGCCAG TTTCCAGGCA
CTGCAATTCA AGCTGGCCGA CATGGCGACG GAGCTGGTCG CCGCGCGGCA GATGGTGCGG
CTGGCCGCCA GCAAACTCGA TGCCGGTGCG CGCGATGCCT CCACCTACTG CGCCATGGCC
AAGCGCTTCG CCACCGATGC GGGATTCGAC GTGGTGAACG AGGCGCTGCA GTTGCATGGC
GGCTACGGCT ACATCCGCGA ATACCCGCTG GAGCGCCTGC TGCGCGATGC GCGCGTGCAC
CAGATCCTGG AAGGCACGAA CGAGATCATG CGCGTCATCA TCGCCCGGCG CATGCTCGAC
GGCGGCGCGC CGGACGCGAT CCGCTGA
|
|---|
| Protein sequence | MDFELTEEQR AFADTAREFA RAELAPHAAQ WDAEGIFPRE AIAKAGALGF CGLYAPENAG
GLALPRLDAT LVFEEMAAID PSTTAFITIH NMATWMLGTW ATDAVRNHWG PLLTSGQKLA
SYCLTEPGAG SDAASLKTRA ELVGNEYVIN GAKAFISGAG STDVLVLMAR TGSPDSGAGG
ISAFAVPADA AGIQYGKKEE KMGWNSQPTR TISFDSVRIP ADHLLGAGGE GFKIAMKGLD
GGRINIATCS VGAAQGALNA AQQYMQDRKQ FGKAIASFQA LQFKLADMAT ELVAARQMVR
LAASKLDAGA RDASTYCAMA KRFATDAGFD VVNEALQLHG GYGYIREYPL ERLLRDARVH
QILEGTNEIM RVIIARRMLD GGAPDAIR
|
|---|
| |