Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1103 |
Symbol | |
ID | 4077810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1183842 |
End bp | 1184987 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006407 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_613098 |
Protein GI | 99080944 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTCG CAATGACAGA AGAGCAGACG GCCATCTTTG ACATGGCTTA TGGCTTTGGC CAGGAGCATA TCGCGCCTTT TGCCCGCCAG TGGGAATCTG AAGGCACCAT CCCCAAGGAT CTGTGGCCCA AGGTGGGTGA GCTGGGCTTT GGCTCTCTTT ATGTAAGCGA AGAGTCCGGC GGCTCCGGCC TTTTGCGGCT GGATGCCACC CTGGTCTTTG AGGCGCTGTC GATGGCCTGC CCCTCGGTGG CAGCGTTCCT GTCGATTCAC AACATGTGCG CCAAGATGCT CGACATGTTT GCCAGCGACG ATTTGAAGGC GCGCGTGATG GACGACGTCA TGAGCCTCAA CACGGTGCTG AGCTACTGCC TCACCGAACC GGGGTCCGGC TCTGACGCGG CGGCGCTCAA GACCCGCGCG AGCCGGGACA ACGAAGGCTA TGTGCTCAAC GGCACCAAGG CGTTCATCTC CGGCGGCGGC TATTCCGACG CCTATGTCTG CATGGTGCGC ACCGGCGAGG ACGGCCCCAA GGGGATCTCC ACGCTCTATG TCGAGGATGG CACGCCGGGG CTCTCGTTTG GCGGGCTTGA GGACAAGATG GGCTGGAAGA GCCAGCCCAC CGCGCAGGTG CAATTTGACG ACTGCCGCGT GCCGGCGGGC AATCTCGTGG GCCAGGAGGG CGACGGGTTC AAATACGCCA TGAAGGGCCT TGATGGCGGG CGTCTCAACA TTGCCGCCTG TTCGCTTGGC GCCGCGCAAG CCGGGCTAAA TGCGACGCTG CAATACATGT CCGAGCGCAA GGCCTTTGGC AAATCCATCG ACCAGTTCCA GGGGCTTCAG TTCCGCCTCG CGGATATGGA GATCGAGCTT CAGGCCGCAC GCACCTTCCT GCGCCAGGCC GCATGGAAAC TGGACCAGGG CAGCCCGGAT GCCACCAAAT TCTGCGCCAT GGCAAAGAAA TTCGTGACCG AAACCGGCTC CAACGTGGTG GATCAATGCC TGCAGCTGCA CGGCGGCTAT GGCTATCTCG CGGATTACGG CATCGAGAAG CTGGTACGCG ACCTTCGGGT GCATCAGATC CTTGAAGGCA CCAATGAGAT CATGCGCGTG ATCGTCGCCC GTCATATGCT GGCGGAAAAC CACTAA
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Protein sequence | MDFAMTEEQT AIFDMAYGFG QEHIAPFARQ WESEGTIPKD LWPKVGELGF GSLYVSEESG GSGLLRLDAT LVFEALSMAC PSVAAFLSIH NMCAKMLDMF ASDDLKARVM DDVMSLNTVL SYCLTEPGSG SDAAALKTRA SRDNEGYVLN GTKAFISGGG YSDAYVCMVR TGEDGPKGIS TLYVEDGTPG LSFGGLEDKM GWKSQPTAQV QFDDCRVPAG NLVGQEGDGF KYAMKGLDGG RLNIAACSLG AAQAGLNATL QYMSERKAFG KSIDQFQGLQ FRLADMEIEL QAARTFLRQA AWKLDQGSPD ATKFCAMAKK FVTETGSNVV DQCLQLHGGY GYLADYGIEK LVRDLRVHQI LEGTNEIMRV IVARHMLAEN H
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